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LSST Data Management Base Package
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Public Member Functions | Static Public Attributes | Protected Attributes | Static Protected Attributes | List of all members
lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask Class Reference
Inheritance diagram for lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask:

Public Member Functions

 __init__ (self, *args, **kwargs)
 
 run (self, maskedImage)
 

Static Public Attributes

 ConfigClass = ExampleSigmaClippedStatsConfig
 

Protected Attributes

 _badPixelMask
 
 _statsControl
 

Static Protected Attributes

str _DefaultName = "exampleSigmaClippedStats"
 

Detailed Description

Example task to compute sigma-clipped mean and standard deviation of an image.

This is a simple example task designed to be run as a subtask by
ExampleCmdLineTask. See also ExampleSimpleStatsTask as a variant that is
even simpler.

Notes
-----
The init method may compute anything that that does not require data.
In this case we create a statistics control object using the config
(which cannot change once the task is created).

Definition at line 50 of file exampleStatsTasks.py.

Constructor & Destructor Documentation

◆ __init__()

lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask.__init__ ( self,
* args,
** kwargs )

Definition at line 66 of file exampleStatsTasks.py.

66 def __init__(self, *args, **kwargs):
67 pipeBase.Task.__init__(self, *args, **kwargs)
68
69 self._badPixelMask = afwImage.Mask.getPlaneBitMask(self.config.badMaskPlanes)
70
71 self._statsControl = afwMath.StatisticsControl()
72 self._statsControl.setNumSigmaClip(self.config.numSigmaClip)
73 self._statsControl.setNumIter(self.config.numIter)
74 self._statsControl.setAndMask(self._badPixelMask)
75
Pass parameters to a Statistics object.
Definition Statistics.h:83

Member Function Documentation

◆ run()

lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask.run ( self,
maskedImage )
Compute and return statistics for a masked image.

Parameters
----------
maskedImage : `lsst.afw.image.MaskedImage`
    Masked image to compute statistics on.

Returns
-------
stats : `lsst.pipe.base.Struct`
    Statistics as a struct with attributes:

    ``mean``
        Mean of image plane (`float`).
    ``meanErr``
        Uncertainty in mean (`float`).
    ``stdDev``
        Standard deviation of image plane (`float`).
    ``stdDevErr``
        Uncertainty in standard deviation (`float`).

Definition at line 77 of file exampleStatsTasks.py.

77 def run(self, maskedImage):
78 """Compute and return statistics for a masked image.
79
80 Parameters
81 ----------
82 maskedImage : `lsst.afw.image.MaskedImage`
83 Masked image to compute statistics on.
84
85 Returns
86 -------
87 stats : `lsst.pipe.base.Struct`
88 Statistics as a struct with attributes:
89
90 ``mean``
91 Mean of image plane (`float`).
92 ``meanErr``
93 Uncertainty in mean (`float`).
94 ``stdDev``
95 Standard deviation of image plane (`float`).
96 ``stdDevErr``
97 Uncertainty in standard deviation (`float`).
98 """
99 statObj = afwMath.makeStatistics(maskedImage, afwMath.MEANCLIP | afwMath.STDEVCLIP | afwMath.ERRORS,
100 self._statsControl)
101 mean, meanErr = statObj.getResult(afwMath.MEANCLIP)
102 stdDev, stdDevErr = statObj.getResult(afwMath.STDEVCLIP)
103 self.log.info("clipped mean=%0.2f; meanErr=%0.2f; stdDev=%0.2f; stdDevErr=%0.2f",
104 mean, meanErr, stdDev, stdDevErr)
105 return pipeBase.Struct(
106 mean=mean,
107 meanErr=meanErr,
108 stdDev=stdDev,
109 stdDevErr=stdDevErr,
110 )
111
112
Statistics makeStatistics(lsst::afw::image::Image< Pixel > const &img, lsst::afw::image::Mask< image::MaskPixel > const &msk, int const flags, StatisticsControl const &sctrl=StatisticsControl())
Handle a watered-down front-end to the constructor (no variance)
Definition Statistics.h:361

Member Data Documentation

◆ _badPixelMask

lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask._badPixelMask
protected

Definition at line 69 of file exampleStatsTasks.py.

◆ _DefaultName

str lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask._DefaultName = "exampleSigmaClippedStats"
staticprotected

Definition at line 64 of file exampleStatsTasks.py.

◆ _statsControl

lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask._statsControl
protected

Definition at line 71 of file exampleStatsTasks.py.

◆ ConfigClass

lsst.pipe.tasks.exampleStatsTasks.ExampleSigmaClippedStatsTask.ConfigClass = ExampleSigmaClippedStatsConfig
static

Definition at line 63 of file exampleStatsTasks.py.


The documentation for this class was generated from the following file: