27from __future__
import annotations
34 "FieldValidationError",
35 "UnexpectedProxyUsageError",
50from types
import GenericAlias
51from typing
import Any, ForwardRef, Generic, TypeVar, cast, overload
60from .callStack
import getCallStack, getStackFrame
61from .comparison
import compareConfigs, compareScalars, getComparisonName
64 YamlLoaders: tuple[Any, ...] = (yaml.Loader, yaml.FullLoader, yaml.SafeLoader, yaml.UnsafeLoader)
68 from yaml
import CLoader
70 YamlLoaders += (CLoader,)
79 """A Subclass of python's GenericAlias used in defining and instantiating
82 This class differs from `types.GenericAlias` in that it calls a method
83 named _parseTypingArgs defined on Fields. This method gives Field and its
84 subclasses an opportunity to transform type parameters into class key word
85 arguments. Code authors do not need to implement any returns of this object
86 directly, and instead only need implement _parseTypingArgs, if a Field
87 subclass differs from the base class implementation.
89 This class is intended to be an implementation detail, returned from a
90 Field's `__class_getitem__` method.
93 def __call__(self, *args: Any, **kwds: Any) -> Any:
94 origin_kwargs = self._parseTypingArgs(self.__args__, kwds)
95 return super().
__call__(*args, **{**kwds, **origin_kwargs})
98FieldTypeVar = TypeVar(
"FieldTypeVar")
102 """Exception raised when a proxy class is used in a context that suggests
103 it should have already been converted to the thing it proxies.
108 """Generate nested configuration names."""
109 if not prefix
and not name:
110 raise ValueError(
"Invalid name: cannot be None")
113 elif prefix
and name:
114 name = prefix +
"." + name
116 if index
is not None:
117 return f
"{name}[{index!r}]"
123 """Cast a value to a type, if appropriate.
130 Data type, such as `float`, `int`, or `str`.
135 If appropriate, the returned value is ``x`` cast to the given type
136 ``dtype``. If the cast cannot be performed the original value of
141 Will convert numpy scalar types to the standard Python equivalents.
143 if dtype
is float
and isinstance(x, numbers.Real):
145 if dtype
is int
and isinstance(x, numbers.Integral):
151 """Generate a fully-qualified type name.
156 Fully-qualified type name.
160 This function is used primarily for writing config files to be executed
161 later upon with the 'load' function.
163 if hasattr(x,
"__module__")
and hasattr(x,
"__name__"):
167 if xtype.__module__ ==
"builtins":
168 return xtype.__name__
170 return f
"{xtype.__module__}.{xtype.__name__}"
176 """Represent a Config object in a form suitable for YAML.
178 Stores the serialized stream as a scalar block string.
180 stream = io.StringIO()
181 data.saveToStream(stream)
182 config_py = stream.getvalue()
186 config_py = config_py.rstrip() +
"\n"
190 config_py = re.sub(
r"\s+$",
"\n", config_py, flags=re.MULTILINE)
193 return dumper.represent_scalar(
"lsst.pex.config.Config", config_py, style=
"|")
196 """Construct a config from YAML."""
197 config_py = loader.construct_scalar(node)
198 return Config._fromPython(config_py)
202 for loader
in YamlLoaders:
203 yaml.add_constructor(
"lsst.pex.config.Config", _yaml_config_constructor, Loader=loader)
207 """A metaclass for `lsst.pex.config.Config`.
212 Name to use for class.
213 bases : `~collections.abc.Iterable`
216 Additional parameters.
220 ``ConfigMeta`` adds a dictionary containing all `~lsst.pex.config.Field`
221 class attributes as a class attribute called ``_fields``, and adds
222 the name of each field as an instance variable of the field itself (so you
223 don't have to pass the name of the field to the field constructor).
227 type.__init__(cls, name, bases, dict_)
231 def getFields(classtype):
233 bases = list(classtype.__bases__)
236 fields.update(getFields(b))
238 for k, v
in classtype.__dict__.items():
239 if isinstance(v, Field):
243 fields = getFields(cls)
244 for k, v
in fields.items():
245 setattr(cls, k, copy.deepcopy(v))
248 if isinstance(value, Field):
251 type.__setattr__(cls, name, value)
255 """Raised when a ``~lsst.pex.config.Field`` is not valid in a
256 particular ``~lsst.pex.config.Config``.
260 field : `lsst.pex.config.Field`
261 The field that was not valid.
262 config : `lsst.pex.config.Config`
263 The config containing the invalid field.
265 Text describing why the field was not valid.
270 """Type of the `~lsst.pex.config.Field` that incurred the error.
274 """Name of the `~lsst.pex.config.Field` instance that incurred the
279 lsst.pex.config.Field.name
283 """Fully-qualified name of the `~lsst.pex.config.Field` instance
287 self.
history = config.history.setdefault(field.name, [])
288 """Full history of all changes to the `~lsst.pex.config.Field`
293 """File and line number of the `~lsst.pex.config.Field` definition.
298 f
"{self.fieldType.__name__} '{self.fullname}' failed validation: {msg}\n"
299 f
"For more information see the Field definition at:\n{self.fieldSource.format()}"
300 f
" and the Config definition at:\n{self.configSource.format()}"
306 """A field in a `~lsst.pex.config.Config` that supports `int`, `float`,
307 `complex`, `bool`, and `str` data types.
312 A description of the field for users.
313 dtype : type, optional
314 The field's data type. ``Field`` only supports basic data types:
315 `int`, `float`, `complex`, `bool`, and `str`. See
316 `Field.supportedTypes`. Optional if supplied as a typing argument to
318 default : object, optional
319 The field's default value.
320 check : callable, optional
321 A callable that is called with the field's value. This callable should
322 return `False` if the value is invalid. More complex inter-field
323 validation can be written as part of the
324 `lsst.pex.config.Config.validate` method.
325 optional : `bool`, optional
326 This sets whether the field is considered optional, and therefore
327 doesn't need to be set by the user. When `False`,
328 `lsst.pex.config.Config.validate` fails if the field's value is `None`.
329 deprecated : None or `str`, optional
330 A description of why this Field is deprecated, including removal date.
331 If not None, the string is appended to the docstring for this Field.
336 Raised when the ``dtype`` parameter is not one of the supported types
337 (see `Field.supportedTypes`).
353 ``Field`` instances (including those of any subclass of ``Field``) are used
354 as class attributes of `~lsst.pex.config.Config` subclasses (see the
355 example, below). ``Field`` attributes work like the `property` attributes
356 of classes that implement custom setters and getters. `Field` attributes
357 belong to the class, but operate on the instance. Formally speaking,
358 `Field` attributes are `descriptors
359 <https://docs.python.org/3/howto/descriptor.html>`_.
361 When you access a `Field` attribute on a `Config` instance, you don't
362 get the `Field` instance itself. Instead, you get the value of that field,
363 which might be a simple type (`int`, `float`, `str`, `bool`) or a custom
364 container type (like a `lsst.pex.config.List`) depending on the field's
365 type. See the example, below.
367 Fields can be annotated with a type similar to other python classes (python
368 specification `here <https://peps.python.org/pep-0484/#generics>`_ ).
369 See the name field in the Config example below for an example of this.
370 Unlike most other uses in python, this has an effect at type checking *and*
371 runtime. If the type is specified with a class annotation, it will be used
372 as the value of the ``dtype`` in the ``Field`` and there is no need to
373 specify it as an argument during instantiation.
375 There are Some notes on dtype through type annotation syntax. Type
376 annotation syntax supports supplying the argument as a string of a type
377 name. i.e. "float", but this cannot be used to resolve circular references.
378 Type annotation syntax can be used on an identifier in addition to Class
379 assignment i.e. ``variable: Field[str] = Config.someField`` vs
380 ``someField = Field[str](doc="some doc"). However, this syntax is only
381 useful for annotating the type of the identifier (i.e. variable in previous
382 example) and does nothing for assigning the dtype of the ``Field``.
386 Instances of ``Field`` should be used as class attributes of
387 `lsst.pex.config.Config` subclasses:
389 >>> from lsst.pex.config import Config, Field
390 >>> class Example(Config):
391 ... myInt = Field("An integer field.", int, default=0)
392 ... name = Field[str](doc="A string Field")
393 >>> print(config.myInt)
396 >>> print(config.myInt)
401 """Identifier (variable name) used to refer to a Field within a Config
405 supportedTypes = {str, bool, float, int, complex}
406 """Supported data types for field values (`set` of types).
411 params: tuple[type, ...] | tuple[str, ...], kwds: Mapping[str, Any]
412 ) -> Mapping[str, Any]:
413 """Parse type annotations into keyword constructor arguments.
415 This is a special private method that interprets type arguments (i.e.
416 Field[str]) into keyword arguments to be passed on to the constructor.
418 Subclasses of Field can implement this method to customize how they
419 handle turning type parameters into keyword arguments (see DictField
424 params : `tuple` of `type` or `tuple` of str
425 Parameters passed to the type annotation. These will either be
426 types or strings. Strings are to interpreted as forward references
427 and will be treated as such.
428 kwds : `MutableMapping` with keys of `str` and values of `Any`
429 These are the user supplied keywords that are to be passed to the
434 kwds : `MutableMapping` with keys of `str` and values of `Any`
435 The mapping of keywords that will be passed onto the constructor
436 of the Field. Should be filled in with any information gleaned
437 from the input parameters.
442 Raised if params is of incorrect length.
443 Raised if a forward reference could not be resolved
444 Raised if there is a conflict between params and values in kwds
447 raise ValueError(
"Only single type parameters are supported")
448 unpackedParams = params[0]
449 if isinstance(unpackedParams, str):
450 _typ = ForwardRef(unpackedParams)
454 result = _typ._evaluate(globals(), locals(), recursive_guard=set())
456 raise ValueError(
"Could not deduce type from input")
457 unpackedParams = cast(type, result)
458 if "dtype" in kwds
and kwds[
"dtype"] != unpackedParams:
459 raise ValueError(
"Conflicting definition for dtype")
460 elif "dtype" not in kwds:
461 kwds = {**kwds, **{
"dtype": unpackedParams}}
467 def __init__(self, doc, dtype=None, default=None, check=None, optional=False, deprecated=None):
470 "dtype must either be supplied as an argument or as a type argument to the class"
473 raise ValueError(f
"Unsupported Field dtype {_typeStr(dtype)}")
475 source = getStackFrame()
483 deprecated=deprecated,
486 def _setup(self, doc, dtype, default, check, optional, source, deprecated):
487 """Set attributes, usually during initialization."""
489 """Data type for the field.
493 raise ValueError(
"Docstring is empty.")
496 if deprecated
is not None:
497 doc = f
"{doc} Deprecated: {deprecated}"
499 """A description of the field (`str`).
503 """If not None, a description of why this field is deprecated (`str`).
506 self.
__doc__ = f
"{doc} (`{dtype.__name__}`"
507 if optional
or default
is not None:
508 self.
__doc__ += f
", default ``{default!r}``"
512 """Default value for this field.
516 """A user-defined function that validates the value of the field.
520 """Flag that determines if the field is required to be set (`bool`).
522 When `False`, `lsst.pex.config.Config.validate` will fail if the
523 field's value is `None`.
527 """The stack frame where this field is defined (`list` of
528 `~lsst.pex.config.callStack.StackFrame`).
532 r"""Rename the field in a `~lsst.pex.config.Config` (for internal use
537 instance : `lsst.pex.config.Config`
538 The config instance that contains this field.
542 This method is invoked by the `lsst.pex.config.Config` object that
543 contains this field and should not be called directly.
545 Renaming is only relevant for `~lsst.pex.config.Field` instances that
546 hold subconfigs. `~lsst.pex.config.Field`\s that hold subconfigs should
547 rename each subconfig with the full field name as generated by
548 `lsst.pex.config.config._joinNamePath`.
553 """Validate the field (for internal use only).
557 instance : `lsst.pex.config.Config`
558 The config instance that contains this field.
562 lsst.pex.config.FieldValidationError
563 Raised if verification fails.
567 This method provides basic validation:
569 - Ensures that the value is not `None` if the field is not optional.
570 - Ensures type correctness.
571 - Ensures that the user-provided ``check`` function is valid.
573 Most `~lsst.pex.config.Field` subclasses should call
574 `lsst.pex.config.Field.validate` if they re-implement
575 `~lsst.pex.config.Field.validate`.
577 value = self.__get__(instance)
578 if not self.optional
and value
is None:
579 raise FieldValidationError(self, instance,
"Required value cannot be None")
582 """Make this field read-only (for internal use only).
586 instance : `lsst.pex.config.Config`
587 The config instance that contains this field.
591 Freezing is only relevant for fields that hold subconfigs. Fields which
592 hold subconfigs should freeze each subconfig.
594 **Subclasses should implement this method.**
604 The value being validated.
609 Raised if the value's type is incompatible with the field's
612 Raised if the value is rejected by the ``check`` method.
617 if not isinstance(value, self.dtype):
619 f
"Value {value} is of incorrect type {_typeStr(value)}. Expected type {_typeStr(self.dtype)}"
622 if self.check
is not None and not self.check(value):
623 msg = f
"Value {value} is not a valid value"
624 raise ValueError(msg)
627 """Call the _collectImports method on all config
628 objects the field may own, and union them with the supplied imports
633 instance : instance or subclass of `lsst.pex.config.Config`
634 A config object that has this field defined on it
636 Set of python modules that need imported after persistence
640 def save(self, outfile, instance):
641 """Save this field to a file (for internal use only).
645 outfile : file-like object
646 A writeable field handle.
647 instance : `~lsst.pex.config.Config`
648 The `~lsst.pex.config.Config` instance that contains this field.
652 This method is invoked by the `~lsst.pex.config.Config` object that
653 contains this field and should not be called directly.
655 The output consists of the documentation string
656 (`lsst.pex.config.Field.doc`) formatted as a Python comment. The second
657 line is formatted as an assignment: ``{fullname}={value}``.
659 This output can be executed with Python.
661 value = self.__get__(instance)
664 if self.deprecated
and value == self.default:
669 doc =
"# " + str(self.doc).replace(
"\n",
"\n# ")
670 if isinstance(value, float)
and not math.isfinite(value):
672 outfile.write(f
"{doc}\n{fullname}=float('{value!r}')\n\n")
674 outfile.write(f
"{doc}\n{fullname}={value!r}\n\n")
677 """Convert the field value so that it can be set as the value of an
678 item in a `dict` (for internal use only).
682 instance : `~lsst.pex.config.Config`
683 The `~lsst.pex.config.Config` that contains this field.
688 The field's value. See *Notes*.
692 This method invoked by the owning `~lsst.pex.config.Config` object and
693 should not be called directly.
695 Simple values are passed through. Complex data structures must be
696 manipulated. For example, a `~lsst.pex.config.Field` holding a
697 subconfig should, instead of the subconfig object, return a `dict`
698 where the keys are the field names in the subconfig, and the values are
699 the field values in the subconfig.
704 """Copy the storage for this field in the given field into an object
705 suitable for storage in a new copy of that config.
707 Any frozen storage should be unfrozen.
709 return copy.deepcopy(old._storage[self.name])
713 self, instance: None, owner: Any =
None, at: Any =
None, label: str =
"default"
714 ) -> Field[FieldTypeVar]: ...
718 self, instance: Config, owner: Any =
None, at: Any =
None, label: str =
"default"
719 ) -> FieldTypeVar: ...
721 def __get__(self, instance, owner=None, at=None, label="default"):
722 """Define how attribute access should occur on the Config instance
723 This is invoked by the owning config object and should not be called
726 When the field attribute is accessed on a Config class object, it
727 returns the field object itself in order to allow inspection of
730 When the field attribute is access on a config instance, the actual
731 value described by the field (and held by the Config instance) is
739 return instance._storage[self.name]
740 except AttributeError:
741 if not isinstance(instance, Config):
744 raise AttributeError(
745 f
"Config {instance} is missing _storage attribute, likely incorrectly initialized"
749 self, instance: Config, value: FieldTypeVar |
None, at: Any =
None, label: str =
"assignment"
751 """Set an attribute on the config instance.
755 instance : `lsst.pex.config.Config`
756 The config instance that contains this field.
758 Value to set on this field.
759 at : `list` of `~lsst.pex.config.callStack.StackFrame` or `None`,\
761 The call stack (created by
762 `lsst.pex.config.callStack.getCallStack`).
763 label : `str`, optional
764 Event label for the history.
768 This method is invoked by the owning `lsst.pex.config.Config` object
769 and should not be called directly.
771 Derived `~lsst.pex.config.Field` classes may need to override the
772 behavior. When overriding ``__set__``, `~lsst.pex.config.Field` authors
773 should follow the following rules:
775 - Do not allow modification of frozen configs.
776 - Validate the new value **before** modifying the field. Except if the
777 new value is `None`. `None` is special and no attempt should be made
778 to validate it until `lsst.pex.config.Config.validate` is called.
779 - Do not modify the `~lsst.pex.config.Config` instance to contain
781 - If the field is modified, update the history of the
782 `lsst.pex.config.field.Field` to reflect the changes.
784 In order to decrease the need to implement this method in derived
785 `~lsst.pex.config.Field` types, value validation is performed in the
786 `lsst.pex.config.Field._validateValue`. If only the validation step
787 differs in the derived `~lsst.pex.config.Field`, it is simpler to
788 implement `lsst.pex.config.Field._validateValue` than to reimplement
789 ``__set__``. More complicated behavior, however, may require
795 history = instance._history.setdefault(self.name, [])
796 if value
is not None:
800 except BaseException
as e:
803 instance._storage[self.name] = value
806 history.append((value, at, label))
809 """Delete an attribute from a `lsst.pex.config.Config` instance.
813 instance : `lsst.pex.config.Config`
814 The config instance that contains this field.
815 at : `list` of `lsst.pex.config.callStack.StackFrame`
816 The call stack (created by
817 `lsst.pex.config.callStack.getCallStack`).
818 label : `str`, optional
819 Event label for the history.
823 This is invoked by the owning `~lsst.pex.config.Config` object and
824 should not be called directly.
828 self.
__set__(instance,
None, at=at, label=label)
830 def _compare(self, instance1, instance2, shortcut, rtol, atol, output):
831 """Compare a field (named `Field.name`) in two
832 `~lsst.pex.config.Config` instances for equality.
836 instance1 : `lsst.pex.config.Config`
837 Left-hand side `Config` instance to compare.
838 instance2 : `lsst.pex.config.Config`
839 Right-hand side `Config` instance to compare.
840 shortcut : `bool`, optional
842 rtol : `float`, optional
843 Relative tolerance for floating point comparisons.
844 atol : `float`, optional
845 Absolute tolerance for floating point comparisons.
846 output : callable, optional
847 A callable that takes a string, used (possibly repeatedly) to
852 This method must be overridden by more complex `Field` subclasses.
856 lsst.pex.config.compareScalars
858 v1 = getattr(instance1, self.name)
859 v2 = getattr(instance2, self.name)
867 """Importer (for `sys.meta_path`) that records which modules are being
870 *This class does not do any importing itself.*
874 Use this class as a context manager to ensure it is properly uninstalled
877 >>> with RecordingImporter() as importer:
879 ... import numpy as np
880 ... print("Imported: " + importer.getModules())
888 sys.meta_path = [self] + sys.meta_path
896 """Uninstall the importer."""
902 Called as part of the ``import`` chain of events.
908 path : `list` [`str`]
910 target : `~typing.Any`, optional
918 """Get the set of modules that were imported.
922 modules : `set` of `str`
923 Set of imported module names.
930 """Base class for configuration (*config*) objects.
934 A ``Config`` object will usually have several `~lsst.pex.config.Field`
935 instances as class attributes. These are used to define most of the base
938 ``Config`` implements a mapping API that provides many `dict`-like methods,
939 such as `keys`, `values`, and `items`. ``Config`` instances also support
940 the ``in`` operator to test if a field is in the config. Unlike a `dict`,
941 ``Config`` classes are not subscriptable. Instead, access individual
942 fields as attributes of the configuration instance.
946 Config classes are subclasses of ``Config`` that have
947 `~lsst.pex.config.Field` instances (or instances of
948 `~lsst.pex.config.Field` subclasses) as class attributes:
950 >>> from lsst.pex.config import Config, Field, ListField
951 >>> class DemoConfig(Config):
952 ... intField = Field(doc="An integer field", dtype=int, default=42)
953 ... listField = ListField(
954 ... doc="List of favorite beverages.",
956 ... default=["coffee", "green tea", "water"],
958 >>> config = DemoConfig()
960 Configs support many `dict`-like APIs:
963 ['intField', 'listField']
964 >>> "intField" in config
967 Individual fields can be accessed as attributes of the configuration:
971 >>> config.listField.append("earl grey tea")
972 >>> print(config.listField)
973 ['coffee', 'green tea', 'water', 'earl grey tea']
976 _storage: dict[str, Any]
977 _fields: dict[str, Field]
978 _history: dict[str, list[Any]]
982 """Iterate over fields."""
990 names : `~collections.abc.KeysView`
991 List of `lsst.pex.config.Field` names.
1000 values : `~collections.abc.ValuesView`
1001 Iterator of field values.
1006 """Get configurations as ``(field name, field value)`` pairs.
1010 items : `~collections.abc.ItemsView`
1011 Iterator of tuples for each configuration. Tuple items are:
1019 """Return `True` if the specified field exists in this config.
1024 Field name to test for.
1029 `True` if the specified field exists in the config.
1034 """Allocate a new `lsst.pex.config.Config` object.
1036 In order to ensure that all Config object are always in a proper state
1037 when handed to users or to derived `~lsst.pex.config.Config` classes,
1038 some attributes are handled at allocation time rather than at
1041 This ensures that even if a derived `~lsst.pex.config.Config` class
1042 implements ``__init__``, its author does not need to be concerned about
1043 when or even the base ``Config.__init__`` should be called.
1045 name = kw.pop(
"__name",
None)
1046 at = kw.pop(
"__at", getCallStack())
1048 kw.pop(
"__label",
"default")
1050 instance = object.__new__(cls)
1051 instance._frozen =
False
1052 instance._name = name
1053 instance._storage = {}
1054 instance._history = {}
1055 instance._imports = set()
1057 for field
in instance._fields.values():
1058 instance._history[field.name] = []
1059 field.__set__(instance, field.default, at=at + [field.source], label=
"default")
1061 instance.setDefaults()
1063 instance.update(__at=at, **kw)
1067 """Return a deep copy of this config.
1071 The returned config object is not frozen, even if the original was.
1072 If a nested config object is copied, it retains the name from its
1075 Nested objects are only shared between the new and old configs if they
1076 are not possible to modify via the config's interfaces (e.g. entries
1077 in the the history list are not copied, but the lists themselves are,
1078 so modifications to one copy do not modify the other).
1080 instance = object.__new__(type(self))
1081 instance._frozen =
False
1082 instance._name = self.
_name
1083 instance._history = {k: list(v)
for k, v
in self.
_history.
items()}
1084 instance._imports = set(self.
_imports)
1087 instance._storage = {k: self.
_fields[k]._copy_storage(self, instance)
for k
in self.
_storage}
1091 """Reduction for pickling (function with arguments to reproduce).
1093 We need to condense and reconstitute the `~lsst.pex.config.Config`,
1094 since it may contain lambdas (as the ``check`` elements) that cannot
1099 stream = io.StringIO()
1101 return (unreduceConfig, (self.
__class__, stream.getvalue().encode()))
1104 """Subclass hook for computing defaults.
1108 Derived `~lsst.pex.config.Config` classes that must compute defaults
1109 rather than using the `~lsst.pex.config.Field` instances's defaults
1110 should do so here. To correctly use inherited defaults,
1111 implementations of ``setDefaults`` must call their base class's
1117 """Update values of fields specified by the keyword arguments.
1122 Keywords are configuration field names. Values are configuration
1127 The ``__at`` and ``__label`` keyword arguments are special internal
1128 keywords. They are used to strip out any internal steps from the
1129 history tracebacks of the config. Do not modify these keywords to
1130 subvert a `~lsst.pex.config.Config` instance's history.
1134 This is a config with three fields:
1136 >>> from lsst.pex.config import Config, Field
1137 >>> class DemoConfig(Config):
1138 ... fieldA = Field(doc="Field A", dtype=int, default=42)
1139 ... fieldB = Field(doc="Field B", dtype=bool, default=True)
1140 ... fieldC = Field(doc="Field C", dtype=str, default="Hello world")
1141 >>> config = DemoConfig()
1143 These are the default values of each field:
1145 >>> for name, value in config.iteritems():
1146 ... print(f"{name}: {value}")
1149 fieldC: 'Hello world'
1151 Using this method to update ``fieldA`` and ``fieldC``:
1153 >>> config.update(fieldA=13, fieldC="Updated!")
1155 Now the values of each field are:
1157 >>> for name, value in config.iteritems():
1158 ... print(f"{name}: {value}")
1163 at = kw.pop(
"__at", getCallStack())
1164 label = kw.pop(
"__label",
"update")
1166 for name, value
in kw.items():
1168 field = self._fields[name]
1169 field.__set__(self, value, at=at, label=label)
1170 except KeyError
as e:
1171 e.add_note(f
"No field of name {name} exists in config type {_typeStr(self)}")
1174 def load(self, filename, root="config"):
1175 """Modify this config in place by executing the Python code in a
1181 Name of the configuration file. A configuration file is Python
1183 root : `str`, optional
1184 Name of the variable in file that refers to the config being
1187 For example, the value of root is ``"config"`` and the file
1192 Then this config's field ``myField`` is set to ``5``.
1196 lsst.pex.config.Config.loadFromStream
1197 lsst.pex.config.Config.loadFromString
1198 lsst.pex.config.Config.save
1199 lsst.pex.config.Config.saveToStream
1200 lsst.pex.config.Config.saveToString
1202 with open(filename)
as f:
1203 code = compile(f.read(), filename=filename, mode=
"exec")
1207 """Modify this Config in place by executing the Python code in the
1212 stream : file-like object, `str`, `bytes`, or `~types.CodeType`
1213 Stream containing configuration override code. If this is a
1214 code object, it should be compiled with ``mode="exec"``.
1215 root : `str`, optional
1216 Name of the variable in file that refers to the config being
1219 For example, the value of root is ``"config"`` and the file
1224 Then this config's field ``myField`` is set to ``5``.
1225 filename : `str`, optional
1226 Name of the configuration file, or `None` if unknown or contained
1227 in the stream. Used for error reporting.
1228 extraLocals : `dict` of `str` to `object`, optional
1229 Any extra variables to include in local scope when loading.
1233 For backwards compatibility reasons, this method accepts strings, bytes
1234 and code objects as well as file-like objects. New code should use
1235 `loadFromString` instead for most of these types.
1239 lsst.pex.config.Config.load
1240 lsst.pex.config.Config.loadFromString
1241 lsst.pex.config.Config.save
1242 lsst.pex.config.Config.saveToStream
1243 lsst.pex.config.Config.saveToString
1245 if hasattr(stream,
"read"):
1246 if filename
is None:
1247 filename = getattr(stream,
"name",
"?")
1248 code = compile(stream.read(), filename=filename, mode=
"exec")
1251 self.
loadFromString(code, root=root, filename=filename, extraLocals=extraLocals)
1254 """Modify this Config in place by executing the Python code in the
1259 code : `str`, `bytes`, or `~types.CodeType`
1260 Stream containing configuration override code.
1261 root : `str`, optional
1262 Name of the variable in file that refers to the config being
1265 For example, the value of root is ``"config"`` and the file
1270 Then this config's field ``myField`` is set to ``5``.
1271 filename : `str`, optional
1272 Name of the configuration file, or `None` if unknown or contained
1273 in the stream. Used for error reporting.
1274 extraLocals : `dict` of `str` to `object`, optional
1275 Any extra variables to include in local scope when loading.
1280 Raised if a key in extraLocals is the same value as the value of
1285 lsst.pex.config.Config.load
1286 lsst.pex.config.Config.loadFromStream
1287 lsst.pex.config.Config.save
1288 lsst.pex.config.Config.saveToStream
1289 lsst.pex.config.Config.saveToString
1291 if filename
is None:
1294 filename = getattr(code,
"co_filename",
"?")
1296 globals = {
"__file__": filename}
1297 local = {root: self}
1298 if extraLocals
is not None:
1300 if root
in extraLocals:
1302 f
"{root} is reserved and cannot be used as a variable name in extraLocals"
1304 local.update(extraLocals)
1305 exec(code, globals, local)
1309 def save(self, filename, root="config"):
1310 """Save a Python script to the named file, which, when loaded,
1311 reproduces this config.
1316 Desination filename of this configuration.
1317 root : `str`, optional
1318 Name to use for the root config variable. The same value must be
1319 used when loading (see `lsst.pex.config.Config.load`).
1323 lsst.pex.config.Config.saveToStream
1324 lsst.pex.config.Config.saveToString
1325 lsst.pex.config.Config.load
1326 lsst.pex.config.Config.loadFromStream
1327 lsst.pex.config.Config.loadFromString
1329 d = os.path.dirname(filename)
1330 with tempfile.NamedTemporaryFile(mode=
"w", delete=
False, dir=d)
as outfile:
1335 umask = os.umask(0o077)
1337 os.chmod(outfile.name, (~umask & 0o666))
1341 shutil.move(outfile.name, filename)
1344 """Return the Python script form of this configuration as an executable
1349 skipImports : `bool`, optional
1350 If `True` then do not include ``import`` statements in output,
1351 this is to support human-oriented output from ``pipetask`` where
1352 additional clutter is not useful.
1357 A code string readable by `loadFromString`.
1361 lsst.pex.config.Config.save
1362 lsst.pex.config.Config.saveToStream
1363 lsst.pex.config.Config.load
1364 lsst.pex.config.Config.loadFromStream
1365 lsst.pex.config.Config.loadFromString
1367 buffer = io.StringIO()
1369 return buffer.getvalue()
1372 """Save a configuration file to a stream, which, when loaded,
1373 reproduces this config.
1377 outfile : file-like object
1378 Destination file object write the config into. Accepts strings not
1380 root : `str`, optional
1381 Name to use for the root config variable. The same value must be
1382 used when loading (see `lsst.pex.config.Config.load`).
1383 skipImports : `bool`, optional
1384 If `True` then do not include ``import`` statements in output,
1385 this is to support human-oriented output from ``pipetask`` where
1386 additional clutter is not useful.
1390 lsst.pex.config.Config.save
1391 lsst.pex.config.Config.saveToString
1392 lsst.pex.config.Config.load
1393 lsst.pex.config.Config.loadFromStream
1394 lsst.pex.config.Config.loadFromString
1403 configType = type(self)
1405 outfile.write(f
"import {configType.__module__}\n")
1410 f
'assert type({root}) is {typeString}, f"config is of type '
1411 f
'{{type({root}).__module__}}.{{type({root}).__name__}} instead of {typeString}"\n\n'
1414 if imp
in sys.modules
and sys.modules[imp]
is not None:
1415 outfile.write(f
"import {imp}\n")
1421 """Make this config, and all subconfigs, read-only."""
1427 """Save this config to an open stream object.
1431 outfile : file-like object
1432 Destination file object write the config into. Accepts strings not
1436 field.save(outfile, self)
1439 """Add module containing self to the list of things to import and
1440 then loops over all the fields in the config calling a corresponding
1443 The field method will call _collectImports on any
1444 configs it may own and return the set of things to import. This
1445 returned set will be merged with the set of imports for this config
1450 field._collectImports(self, self.
_imports)
1453 """Make a dictionary of field names and their values.
1458 Dictionary with keys that are `~lsst.pex.config.Field` names.
1459 Values are `~lsst.pex.config.Field` values.
1463 lsst.pex.config.Field.toDict
1467 This method uses the `~lsst.pex.config.Field.toDict` method of
1468 individual fields. Subclasses of `~lsst.pex.config.Field` may need to
1469 implement a ``toDict`` method for *this* method to work.
1473 dict_[name] = field.toDict(self)
1477 """Get all the field names in the config, recursively.
1481 names : `list` of `str`
1488 with io.StringIO()
as strFd:
1490 contents = strFd.getvalue()
1496 for line
in contents.split(
"\n"):
1497 if re.search(
r"^((assert|import)\s+|\s*$|#)", line):
1500 mat = re.search(
r"^(?:config\.)?([^=]+)\s*=\s*.*", line)
1502 keys.append(mat.group(1))
1507 """Rename this config object in its parent `~lsst.pex.config.Config`.
1512 New name for this config in its parent `~lsst.pex.config.Config`.
1516 This method uses the `~lsst.pex.config.Field.rename` method of
1517 individual `lsst.pex.config.Field` instances.
1518 `lsst.pex.config.Field` subclasses may need to implement a ``rename``
1519 method for *this* method to work.
1523 lsst.pex.config.Field.rename
1530 """Validate the Config, raising an exception if invalid.
1534 lsst.pex.config.FieldValidationError
1535 Raised if verification fails.
1539 The base class implementation performs type checks on all fields by
1540 calling their `~lsst.pex.config.Field.validate` methods.
1542 Complex single-field validation can be defined by deriving new Field
1543 types. For convenience, some derived `lsst.pex.config.Field`-types
1544 (`~lsst.pex.config.ConfigField` and
1545 `~lsst.pex.config.ConfigChoiceField`) are defined in
1546 ``lsst.pex.config`` that handle recursing into subconfigs.
1548 Inter-field relationships should only be checked in derived
1549 `~lsst.pex.config.Config` classes after calling this method, and base
1550 validation is complete.
1553 field.validate(self)
1556 """Format a configuration field's history to a human-readable format.
1561 Name of a `~lsst.pex.config.Field` in this config.
1563 Keyword arguments passed to `lsst.pex.config.history.format`.
1568 A string containing the formatted history.
1572 lsst.pex.config.history.format
1576 return pexHist.format(self, name, **kwargs)
1578 history = property(
lambda x: x._history)
1579 """Read-only history.
1583 """Set an attribute (such as a field's value).
1587 Unlike normal Python objects, `~lsst.pex.config.Config` objects are
1588 locked such that no additional attributes nor properties may be added
1589 to them dynamically.
1591 Although this is not the standard Python behavior, it helps to protect
1592 users from accidentally mispelling a field name, or trying to set a
1596 if self.
_fields[attr].deprecated
is not None:
1599 f
"Config field {fullname} is deprecated: {self._fields[attr].deprecated}",
1606 self.
_fields[attr].__set__(self, value, at=at, label=label)
1607 elif hasattr(getattr(self.
__class__, attr,
None),
"__set__"):
1609 return object.__setattr__(self, attr, value)
1610 elif attr
in self.__dict__
or attr
in (
"_name",
"_history",
"_storage",
"_frozen",
"_imports"):
1612 self.__dict__[attr] = value
1615 raise AttributeError(f
"{_typeStr(self)} has no attribute {attr}")
1621 self.
_fields[attr].__delete__(self, at=at, label=label)
1623 object.__delattr__(self, attr)
1626 if type(other)
is type(self):
1628 thisValue = getattr(self, name)
1629 otherValue = getattr(other, name)
1630 if isinstance(thisValue, float)
and math.isnan(thisValue):
1631 if not math.isnan(otherValue):
1633 elif thisValue != otherValue:
1639 return not self.
__eq__(other)
1642 return str(self.
toDict())
1645 return "{}({})".format(
1647 ", ".join(f
"{k}={v!r}" for k, v
in self.
toDict().
items()
if v
is not None),
1650 def compare(self, other, shortcut=True, rtol=1e-8, atol=1e-8, output=None):
1651 """Compare this configuration to another `~lsst.pex.config.Config` for
1656 other : `lsst.pex.config.Config`
1657 Other `~lsst.pex.config.Config` object to compare against this
1659 shortcut : `bool`, optional
1660 If `True`, return as soon as an inequality is found. Default is
1662 rtol : `float`, optional
1663 Relative tolerance for floating point comparisons.
1664 atol : `float`, optional
1665 Absolute tolerance for floating point comparisons.
1666 output : callable, optional
1667 A callable that takes a string, used (possibly repeatedly) to
1668 report inequalities.
1673 `True` when the two `lsst.pex.config.Config` instances are equal.
1674 `False` if there is an inequality.
1678 lsst.pex.config.compareConfigs
1682 Unselected targets of `~lsst.pex.config.RegistryField` fields and
1683 unselected choices of `~lsst.pex.config.ConfigChoiceField` fields
1684 are not considered by this method.
1686 Floating point comparisons are performed by `numpy.allclose`.
1688 name1 = self.
_name if self.
_name is not None else "config"
1689 name2 = other._name
if other._name
is not None else "config"
1691 return compareConfigs(name, self, other, shortcut=shortcut, rtol=rtol, atol=atol, output=output)
1695 """Run initialization for every subclass.
1697 Specifically registers the subclass with a YAML representer
1698 and YAML constructor (if pyyaml is available)
1705 yaml.add_representer(cls, _yaml_config_representer)
1709 """Instantiate a `Config`-subclass from serialized Python form.
1714 A serialized form of the Config as created by
1715 `Config.saveToStream`.
1720 Reconstructed `Config` instant.
1727 """Return the Config subclass required by this Config serialization.
1732 A serialized form of the Config as created by
1733 `Config.saveToStream`.
1738 The `Config` subclass associated with this config.
1750 matches = re.search(
r"^import ([\w.]+)\nassert type\(\S+\)(?:\s*==\s*| is )(.*?),", config_py)
1753 first_line, second_line, _ = config_py.split(
"\n", 2)
1755 f
"First two lines did not match expected form. Got:\n - {first_line}\n - {second_line}"
1758 module_name = matches.group(1)
1759 module = importlib.import_module(module_name)
1762 full_name = matches.group(2)
1765 if not full_name.startswith(module_name):
1766 raise ValueError(f
"Module name ({module_name}) inconsistent with full name ({full_name})")
1771 remainder = full_name[len(module_name) + 1 :]
1772 components = remainder.split(
".")
1774 for component
in components:
1775 pytype = getattr(pytype, component)
1780 """Create a `~lsst.pex.config.Config` from a stream.
1784 cls_ : `lsst.pex.config.Config`-type
1785 A `lsst.pex.config.Config` type (not an instance) that is instantiated
1786 with configurations in the ``stream``.
1787 stream : file-like object, `str`, or `~types.CodeType`
1788 Stream containing configuration override code.
1792 config : `lsst.pex.config.Config`
1797 lsst.pex.config.Config.loadFromStream
1800 config.loadFromStream(stream)
Any __call__(self, *Any args, **Any kwds)
saveToStream(self, outfile, root="config", skipImports=False)
__setattr__(self, attr, value, at=None, label="assignment")
loadFromStream(self, stream, root="config", filename=None, extraLocals=None)
__new__(cls, *args, **kw)
save(self, filename, root="config")
_fromPython(cls, config_py)
loadFromString(self, code, root="config", filename=None, extraLocals=None)
__delattr__(self, attr, at=None, label="deletion")
saveToString(self, skipImports=False)
formatHistory(self, name, **kwargs)
__init_subclass__(cls, **kwargs)
load(self, filename, root="config")
compare(self, other, shortcut=True, rtol=1e-8, atol=1e-8, output=None)
Mapping[str, Any] _parseTypingArgs(tuple[type,...]|tuple[str,...] params, Mapping[str, Any] kwds)
save(self, outfile, instance)
_collectImports(self, instance, imports)
__delete__(self, instance, at=None, label="deletion")
Field[FieldTypeVar] __get__(self, None instance, Any owner=None, Any at=None, str label="default")
_compare(self, instance1, instance2, shortcut, rtol, atol, output)
_validateValue(self, value)
None __set__(self, Config instance, FieldTypeVar|None value, Any at=None, str label="assignment")
__class_getitem__(cls, tuple[type,...]|type|ForwardRef params)
Any _copy_storage(self, Config old, Config new)
__init__(self, doc, dtype=None, default=None, check=None, optional=False, deprecated=None)
_setup(self, doc, dtype, default, check, optional, source, deprecated)
__init__(self, field, config, msg)
find_spec(self, fullname, path, target=None)
compareConfigs(name, c1, c2, shortcut=True, rtol=1e-8, atol=1e-8, output=None)
getComparisonName(name1, name2)
compareScalars(name, v1, v2, output, rtol=1e-8, atol=1e-8, dtype=None)
_yaml_config_representer(dumper, data)
_classFromPython(config_py)
_joinNamePath(prefix=None, name=None, index=None)
unreduceConfig(cls_, stream)