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LSST Data Management Base Package
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_threshold.cc
Go to the documentation of this file.
1/*
2 * This file is part of afw.
3 *
4 * Developed for the LSST Data Management System.
5 * This product includes software developed by the LSST Project
6 * (https://www.lsst.org).
7 * See the COPYRIGHT file at the top-level directory of this distribution
8 * for details of code ownership.
9 *
10 * This program is free software: you can redistribute it and/or modify
11 * it under the terms of the GNU General Public License as published by
12 * the Free Software Foundation, either version 3 of the License, or
13 * (at your option) any later version.
14 *
15 * This program is distributed in the hope that it will be useful,
16 * but WITHOUT ANY WARRANTY; without even the implied warranty of
17 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
18 * GNU General Public License for more details.
19 *
20 * You should have received a copy of the GNU General Public License
21 * along with this program. If not, see <https://www.gnu.org/licenses/>.
22 */
23
24#include <iostream>
25#include <iomanip>
26
27#include <pybind11/pybind11.h>
28#include <pybind11/stl.h>
29
30#include "lsst/utils/python.h"
31
33
34namespace py = pybind11;
35using namespace py::literals;
36
37namespace lsst {
38namespace afw {
39namespace detection {
40
41void wrapThreshold(utils::python::WrapperCollection& wrappers) {
42 auto clsThreshold = wrappers.wrapType(
43 py::class_<Threshold, std::shared_ptr<Threshold>>(wrappers.module, "Threshold"),
44 [](auto& mod, auto& cls) {
45 cls.def(py::init<double const, typename Threshold::ThresholdType const, bool const,
46 double const>(),
47 "value"_a, "type"_a = Threshold::VALUE, "polarity"_a = true,
48 "includeMultiplier"_a = 1.0);
49
50 cls.def("getType", &Threshold::getType);
51 cls.def_static("parseTypeString", Threshold::parseTypeString);
52 cls.def_static("getTypeString", Threshold::getTypeString);
53 cls.def("getValue", (double (Threshold::*)(const double) const) & Threshold::getValue,
54 "param"_a = -1);
55 //
56 // template<typename ImageT>
57 // double getValue(ImageT const& image) const;
58 //
59 cls.def("getPolarity", &Threshold::getPolarity);
60 cls.def("setPolarity", &Threshold::setPolarity);
61 cls.def("getIncludeMultiplier", &Threshold::getIncludeMultiplier);
62 cls.def("setIncludeMultiplier", &Threshold::setIncludeMultiplier);
63 // Different str/repr so that the latter can be used to create a Threshold.
64 cls.def("__str__", [](Threshold const& self) {
65 std::ostringstream os;
66 std::string polarity = (self.getPolarity() == true) ? "positive" : "negative";
67 os << py::cast(self.getType()).attr("name").cast<std::string>() << std::setprecision(8)
68 << " value=" << self.getValue() << " (" << polarity << ")";
69 if (self.getIncludeMultiplier() != 1.0) {
70 os << " multiplier=" << self.getIncludeMultiplier();
71 }
72 return os.str();
73 });
74 cls.def("__repr__", [](Threshold const& self) {
76 os << std::setprecision(16) << "Threshold(value=" << self.getValue()
77 << ", type=" << py::cast(self.getType()).attr("name").cast<std::string>()
78 << ", polarity=" << self.getPolarity()
79 << ", includeMultiplier=" << self.getIncludeMultiplier() << ")";
80 return os.str();
81 });
82 });
83
84 wrappers.wrapType(py::enum_<Threshold::ThresholdType>(clsThreshold, "ThresholdType"),
85 [](auto& mod, auto& enm) {
86 enm.value("VALUE", Threshold::ThresholdType::VALUE);
87 enm.value("BITMASK", Threshold::ThresholdType::BITMASK);
88 enm.value("STDEV", Threshold::ThresholdType::STDEV);
89 enm.value("VARIANCE", Threshold::ThresholdType::VARIANCE);
90 enm.value("PIXEL_STDEV", Threshold::ThresholdType::PIXEL_STDEV);
91 enm.export_values();
92 });
93
94 wrappers.wrap([](auto& mod) {
95 mod.def("createThreshold", createThreshold, "value"_a, "type"_a = "value", "polarity"_a = true);
96 });
97}
98
99} // namespace detection
100} // namespace afw
101} // namespace lsst
std::ostream * os
Definition: Schema.cc:557
A Threshold is used to pass a threshold value to detection algorithms.
Definition: Threshold.h:43
bool getPolarity() const noexcept
return Threshold's polarity
Definition: Threshold.h:92
double getIncludeMultiplier() const noexcept
return includeMultiplier
Definition: Threshold.h:100
double getValue(const double param=-1) const
return value of threshold, to be interpreted via type
Definition: Threshold.cc:67
@ VARIANCE
Use number of sigma given variance.
Definition: Threshold.h:50
@ VALUE
Use pixel value.
Definition: Threshold.h:47
@ PIXEL_STDEV
Use number of sigma given per-pixel s.d.
Definition: Threshold.h:51
@ STDEV
Use number of sigma given s.d.
Definition: Threshold.h:49
@ BITMASK
Use (pixels & (given mask))
Definition: Threshold.h:48
ThresholdType getType() const noexcept
return type of threshold
Definition: Threshold.h:71
void wrapThreshold(WrapperCollection &)
Threshold createThreshold(const double value, const std::string type="value", const bool polarity=true)
Factory method for creating Threshold objects.
Definition: Threshold.cc:109
T setprecision(T... args)