Classes | |
| class | Buffer |
| class | DisplayImpl |
| class | Ds9Error |
| class | Ds9Event |
Functions | |
| getXpaAccessPoint () | |
| ds9Version () | |
| selectFrame (frame) | |
| ds9Cmd (cmd=None, trap=True, flush=False, silent=True, frame=None, get=False) | |
| initDS9 (execDs9=True) | |
| _i_mtv (data, wcs, title, isMask, metadata) | |
Variables | |
| file | |
| bool | needShow = True |
| _maskTransparency = None | |
| int | XPA_SZ_LINE = 4096 - 100 |
| cmdBuffer | |
| haveGzip = not os.system("gzip < /dev/null > /dev/null 2>&1") | |
Function Documentation
◆ _i_mtv()
|
protected |
Internal routine to display an image or a mask on a DS9 display.
Parameters
----------
data : Subclass of `lsst.afw.image.Image` or `lsst.afw.image.Mask`
Data to display.
wcs : `lsst.afw.geom.SkyWcs`
WCS of data.
title : `str`
Title of display.
isMask : `bool`
Is ``data`` a mask?
metadata : `lsst.daf.base.PropertySet`
Additional metadata.
Definition at line 643 of file ds9.py.
643def _i_mtv(data, wcs, title, isMask, metadata):
644 """Internal routine to display an image or a mask on a DS9 display.
645
646 Parameters
647 ----------
648 data : Subclass of `lsst.afw.image.Image` or `lsst.afw.image.Mask`
649 Data to display.
650 wcs : `lsst.afw.geom.SkyWcs`
651 WCS of data.
652 title : `str`
653 Title of display.
654 isMask : `bool`
655 Is ``data`` a mask?
656 metadata : `lsst.daf.base.PropertySet`
657 Additional metadata.
658 """
659 title = str(title) if title else ""
660
661 if isMask:
662 xpa_cmd = f"xpaset {getXpaAccessPoint()} fits mask"
663 # ds9 mis-handles BZERO/BSCALE in uint16 data.
664 # The following hack works around this.
665 # This is a copy we're modifying
666 if data.getArray().dtype == np.uint16:
667 data |= 0x8000
668 else:
669 xpa_cmd = f"xpaset {getXpaAccessPoint()} fits"
670
671 if haveGzip:
672 xpa_cmd = "gzip | " + xpa_cmd
673
674 with subprocess.Popen(xpa_cmd, stdin=subprocess.PIPE, shell=True) as pfd:
675 ds9Cmd(flush=True, silent=True)
676 afwDisplay.writeFitsImage(pfd, data, wcs, title, metadata)
◆ ds9Cmd()
| lsst.display.ds9.ds9.ds9Cmd | ( | cmd = None, | |
| trap = True, | |||
| flush = False, | |||
| silent = True, | |||
| frame = None, | |||
| get = False ) |
Issue a DS9 command, raising errors as appropriate.
Parameters
----------
cmd : `str`, optional
Command to execute.
trap : `bool`, optional
Trap errors.
flush : `bool`, optional
Flush the output.
silent : `bool`, optional
Do not print trapped error messages.
frame : `int`, optional
Frame number on which to execute command.
get : `bool`, optional
Return xpa response.
Definition at line 227 of file ds9.py.
227def ds9Cmd(cmd=None, trap=True, flush=False, silent=True, frame=None, get=False):
228 """Issue a DS9 command, raising errors as appropriate.
229
230 Parameters
231 ----------
232 cmd : `str`, optional
233 Command to execute.
234 trap : `bool`, optional
235 Trap errors.
236 flush : `bool`, optional
237 Flush the output.
238 silent : `bool`, optional
239 Do not print trapped error messages.
240 frame : `int`, optional
241 Frame number on which to execute command.
242 get : `bool`, optional
243 Return xpa response.
244 """
245
246 if cmd:
247 if frame is not None:
248 cmd = f"{selectFrame(frame)};{cmd}"
249
250 if get:
251 return xpa.get(None, getXpaAccessPoint(), cmd, "").strip()
252
253 # Work around xpa's habit of silently truncating long lines; the value
254 # ``5`` provides some margin to handle new lines and the like.
255 if cmdBuffer._lenCommands + len(cmd) > XPA_SZ_LINE - 5:
256 ds9Cmd(flush=True, silent=silent)
257
258 cmdBuffer._commands += ";" + cmd
259 cmdBuffer._lenCommands += 1 + len(cmd)
260
261 if flush or cmdBuffer._lenCommands >= cmdBuffer._getSize():
262 cmd = (cmdBuffer._commands + "\n")
263 cmdBuffer._commands = ""
264 cmdBuffer._lenCommands = 0
265 else:
266 return
267
268 cmd = cmd.rstrip()
269 if not cmd:
270 return
271
272 try:
273 ret = xpa.set(None, getXpaAccessPoint(), cmd, "", "", 0)
274 if ret:
275 raise OSError(ret)
276 except OSError as e:
277 if not trap:
278 raise Ds9Error(f"XPA: {e}, ({cmd})")
279 elif not silent:
280 print(f"Caught ds9 exception processing command \"{cmd}\": {e}", file=sys.stderr)
281
282
◆ ds9Version()
| lsst.display.ds9.ds9.ds9Version | ( | ) |
Get the version of DS9 in use.
Returns
-------
version : `str`
Version of DS9 in use.
Definition at line 91 of file ds9.py.
91def ds9Version():
92 """Get the version of DS9 in use.
93
94 Returns
95 -------
96 version : `str`
97 Version of DS9 in use.
98 """
99 try:
100 v = ds9Cmd("about", get=True)
101 return v.splitlines()[1].split()[1]
102 except Exception as e:
103 print(f"Error reading version: {e}", file=sys.stderr)
104 return "0.0.0"
105
106
◆ getXpaAccessPoint()
| lsst.display.ds9.ds9.getXpaAccessPoint | ( | ) |
Parse XPA_PORT if set and return an identifier to send DS9 commands.
Returns
-------
xpaAccessPoint : `str`
Either a reference to the local host with the configured port, or the
string ``"ds9"``.
Notes
-----
If you don't have XPA_PORT set, the usual xpans tricks will be played
when we return ``"ds9"``.
Definition at line 63 of file ds9.py.
63def getXpaAccessPoint():
64 """Parse XPA_PORT if set and return an identifier to send DS9 commands.
65
66 Returns
67 -------
68
69 xpaAccessPoint : `str`
70 Either a reference to the local host with the configured port, or the
71 string ``"ds9"``.
72
73 Notes
74 -----
75 If you don't have XPA_PORT set, the usual xpans tricks will be played
76 when we return ``"ds9"``.
77 """
78 xpa_port = os.environ.get("XPA_PORT")
79 if xpa_port:
80 mat = re.search(r"^DS9:ds9\s+(\d+)\s+(\d+)", xpa_port)
81 if mat:
82 port1, port2 = mat.groups()
83
84 return f"127.0.0.1:{port1}"
85 else:
86 print(f"Failed to parse XPA_PORT={xpa_port}", file=sys.stderr)
87
88 return "ds9"
89
90
◆ initDS9()
| lsst.display.ds9.ds9.initDS9 | ( | execDs9 = True | ) |
Initialize DS9.
Parameters
----------
execDs9 : `bool`, optional
If DS9 is not running, attempt to execute it.
Definition at line 283 of file ds9.py.
283def initDS9(execDs9=True):
284 """Initialize DS9.
285
286 Parameters
287 ----------
288 execDs9 : `bool`, optional
289 If DS9 is not running, attempt to execute it.
290 """
291 try:
292 xpa.reset()
293 ds9Cmd("iconify no; raise", False)
294 ds9Cmd("wcs wcsa", False) # include the pixel coordinates WCS (WCSA)
295
296 v0, v1 = ds9Version().split('.')[0:2]
297 global needShow
298 needShow = False
299 try:
300 if int(v0) == 5:
301 needShow = (int(v1) <= 4)
302 except Exception:
303 pass
304 except Ds9Error as e:
305 if not re.search('xpa', os.environ['PATH']):
306 raise Ds9Error('You need the xpa binaries in your path to use ds9 with python')
307
308 if not execDs9:
309 raise Ds9Error
310
311 if not shutil.which("ds9"):
312 raise NameError("ds9 doesn't appear to be on your path")
313 if "DISPLAY" not in os.environ:
314 raise RuntimeError("$DISPLAY isn't set, so I won't be able to start ds9 for you")
315
316 print(f"ds9 doesn't appear to be running ({e}), I'll try to exec it for you")
317
318 os.system('ds9 &')
319 for i in range(10):
320 try:
321 ds9Cmd(selectFrame(1), False)
322 break
323 except Ds9Error:
324 print("waiting for ds9...\r", end="")
325 sys.stdout.flush()
326 time.sleep(0.5)
327 else:
328 print(" \r", end="")
329 break
330
331 sys.stdout.flush()
332
333 raise Ds9Error
334
335
◆ selectFrame()
| lsst.display.ds9.ds9.selectFrame | ( | frame | ) |
Convert integer frame number to DS9 command syntax.
Parameters
----------
frame : `int`
Frame number
Returns
-------
frameString : `str`
Definition at line 212 of file ds9.py.
212def selectFrame(frame):
213 """Convert integer frame number to DS9 command syntax.
214
215 Parameters
216 ----------
217 frame : `int`
218 Frame number
219
220 Returns
221 -------
222 frameString : `str`
223 """
224 return f"frame {frame}"
225
226
Variable Documentation
◆ _maskTransparency
◆ cmdBuffer
◆ file
◆ haveGzip
| lsst.display.ds9.ds9.haveGzip = not os.system("gzip < /dev/null > /dev/null 2>&1") |
◆ needShow
◆ XPA_SZ_LINE
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