LSST Applications  21.0.0-172-gfb10e10a+18fedfabac,22.0.0+297cba6710,22.0.0+80564b0ff1,22.0.0+8d77f4f51a,22.0.0+a28f4c53b1,22.0.0+dcf3732eb2,22.0.1-1-g7d6de66+2a20fdde0d,22.0.1-1-g8e32f31+297cba6710,22.0.1-1-geca5380+7fa3b7d9b6,22.0.1-12-g44dc1dc+2a20fdde0d,22.0.1-15-g6a90155+515f58c32b,22.0.1-16-g9282f48+790f5f2caa,22.0.1-2-g92698f7+dcf3732eb2,22.0.1-2-ga9b0f51+7fa3b7d9b6,22.0.1-2-gd1925c9+bf4f0e694f,22.0.1-24-g1ad7a390+a9625a72a8,22.0.1-25-g5bf6245+3ad8ecd50b,22.0.1-25-gb120d7b+8b5510f75f,22.0.1-27-g97737f7+2a20fdde0d,22.0.1-32-gf62ce7b1+aa4237961e,22.0.1-4-g0b3f228+2a20fdde0d,22.0.1-4-g243d05b+871c1b8305,22.0.1-4-g3a563be+32dcf1063f,22.0.1-4-g44f2e3d+9e4ab0f4fa,22.0.1-42-gca6935d93+ba5e5ca3eb,22.0.1-5-g15c806e+85460ae5f3,22.0.1-5-g58711c4+611d128589,22.0.1-5-g75bb458+99c117b92f,22.0.1-6-g1c63a23+7fa3b7d9b6,22.0.1-6-g50866e6+84ff5a128b,22.0.1-6-g8d3140d+720564cf76,22.0.1-6-gd805d02+cc5644f571,22.0.1-8-ge5750ce+85460ae5f3,master-g6e05de7fdc+babf819c66,master-g99da0e417a+8d77f4f51a,w.2021.48
LSST Data Management Base Package
ExposureFitsReader.h
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21 
22 #ifndef LSST_AFW_IMAGE_EXPOSUREFITSREADER_H
23 #define LSST_AFW_IMAGE_EXPOSUREFITSREADER_H
24 
25 #include <optional>
26 
30 
31 namespace lsst {
32 namespace afw {
33 namespace image {
34 
45 public:
51  explicit ExposureFitsReader(std::string const &fileName);
52 
58  explicit ExposureFitsReader(fits::MemFileManager &manager);
59 
66  explicit ExposureFitsReader(fits::Fits *fitsFile);
67 
68  // FITS readers are not copyable, movable, or assignable.
73 
74  ~ExposureFitsReader() noexcept;
75 
77 
83  std::string readImageDType() const;
84  std::string readMaskDType() const;
85  std::string readVarianceDType() const;
87 
96 
104  lsst::geom::Point2I readXY0(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
105  ImageOrigin origin = PARENT);
106 
111 
118  std::shared_ptr<daf::base::PropertyList> readMetadata();
119 
121  std::optional<table::RecordId> readExposureId();
122 
124  std::shared_ptr<afw::geom::SkyWcs> readWcs();
125 
127  // TODO: remove in DM-27177
128  [[deprecated("Replaced with readFilterLabel. Will be removed after v22.")]] Filter readFilter();
129 
133  // TODO: deprecate in DM-27177, remove in DM-27811
134  std::shared_ptr<FilterLabel> readFilterLabel();
135 
137  std::shared_ptr<PhotoCalib> readPhotoCalib();
138 
140  std::shared_ptr<detection::Psf> readPsf();
141 
143  std::shared_ptr<afw::geom::polygon::Polygon> readValidPolygon();
144 
146  std::shared_ptr<ApCorrMap> readApCorrMap();
147 
149  std::shared_ptr<CoaddInputs> readCoaddInputs();
150 
152  std::shared_ptr<VisitInfo> readVisitInfo();
153 
156 
158  std::shared_ptr<cameraGeom::Detector> readDetector();
159 
161  std::shared_ptr<typehandling::Storable> readComponent(std::string const &componentName);
162 
164  std::map<std::string, std::shared_ptr<table::io::Persistable>> readExtraComponents();
165 
167  std::shared_ptr<ExposureInfo> readExposureInfo();
168 
170 
183  template <typename ImagePixelT>
184  Image<ImagePixelT> readImage(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
185  ImageOrigin origin = PARENT, bool allowUnsafe = false);
186  template <typename ImagePixelT>
187  ndarray::Array<ImagePixelT, 2, 2> readImageArray(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
188  ImageOrigin origin = PARENT, bool allowUnsafe = false);
190 
206  template <typename MaskPixelT>
207  Mask<MaskPixelT> readMask(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
208  ImageOrigin origin = PARENT, bool conformMasks = false,
209  bool allowUnsafe = false);
210 
224  template <typename MaskPixelT>
225  ndarray::Array<MaskPixelT, 2, 2> readMaskArray(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
226  ImageOrigin origin = PARENT, bool allowUnsafe = false);
227 
229 
242  template <typename VariancePixelT>
243  Image<VariancePixelT> readVariance(lsst::geom::Box2I const &bbox = lsst::geom::Box2I(),
244  ImageOrigin origin = PARENT, bool allowUnsafe = false);
245  template <typename VariancePixelT>
246  ndarray::Array<VariancePixelT, 2, 2> readVarianceArray(
247  lsst::geom::Box2I const &bbox = lsst::geom::Box2I(), ImageOrigin origin = PARENT,
248  bool allowUnsafe = false);
250 
266  template <typename ImagePixelT, typename MaskPixelT = MaskPixel, typename VariancePixelT = VariancePixel>
267  MaskedImage<ImagePixelT, MaskPixelT, VariancePixelT> readMaskedImage(
268  lsst::geom::Box2I const &bbox = lsst::geom::Box2I(), ImageOrigin origin = PARENT,
269  bool conformMasks = false, bool allowUnsafe = false);
270 
286  template <typename ImagePixelT, typename MaskPixelT = MaskPixel, typename VariancePixelT = VariancePixel>
287  Exposure<ImagePixelT, MaskPixelT, VariancePixelT> read(
288  lsst::geom::Box2I const &bbox = lsst::geom::Box2I(), ImageOrigin origin = PARENT,
289  bool conformMasks = false, bool allowUnsafe = false);
290 
294  std::string getFileName() const { return _maskedImageReader.getFileName(); }
295 
296 private:
297  class MetadataReader;
298  class ArchiveReader;
299 
300  void _ensureReaders();
301 
302  fits::Fits *_getFitsFile() { return _maskedImageReader._getFitsFile(); }
303 
304  MaskedImageFitsReader _maskedImageReader;
305  std::unique_ptr<MetadataReader> _metadataReader;
306  std::unique_ptr<ArchiveReader> _archiveReader;
307 };
308 
309 } // namespace image
310 } // namespace afw
311 } // namespace lsst
312 
313 #endif // !LSST_AFW_IMAGE_EXPOSUREFITSREADER_H
AmpInfoBoxKey bbox
Definition: Amplifier.cc:117
A simple struct that combines the two arguments that must be passed to most cfitsio routines and cont...
Definition: fits.h:297
Lifetime-management for memory that goes into FITS memory files.
Definition: fits.h:121
A thin wrapper around std::map to allow aperture corrections to be attached to Exposures.
Definition: ApCorrMap.h:45
A simple Persistable struct containing ExposureCatalogs that record the inputs to a coadd.
Definition: CoaddInputs.h:49
A FITS reader class for Exposures and their components.
std::shared_ptr< TransmissionCurve > readTransmissionCurve()
Read the Exposure's transmission curve.
std::string readMaskDType() const
Read a string describing the pixel type of the on-disk image plane.
Exposure< ImagePixelT, MaskPixelT, VariancePixelT > read(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool conformMasks=false, bool allowUnsafe=false)
Read the full Exposure.
std::shared_ptr< typehandling::Storable > readComponent(std::string const &componentName)
Read an arbitrary non-standard component by name.
std::string getFileName() const
Return the name of the file this reader targets.
std::shared_ptr< afw::geom::SkyWcs > readWcs()
Read the Exposure's world coordinate system.
std::shared_ptr< FilterLabel > readFilterLabel()
Read the Exposure's filter information.
MaskedImage< ImagePixelT, MaskPixelT, VariancePixelT > readMaskedImage(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool conformMasks=false, bool allowUnsafe=false)
Read the MaskedImage.
std::map< std::string, std::shared_ptr< table::io::Persistable > > readExtraComponents()
Read the Exposure's non-standard components.
lsst::geom::Point2I readXY0(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT)
Read the image origin from the on-disk image or a subimage thereof.
ndarray::Array< VariancePixelT, 2, 2 > readVarianceArray(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Read the variance plane.
int readSerializationVersion()
Read the serialization version number from the header.
ExposureFitsReader(std::string const &fileName)
Construct a FITS reader object.
std::shared_ptr< detection::Psf > readPsf()
Read the Exposure's point-spread function.
std::shared_ptr< afw::geom::polygon::Polygon > readValidPolygon()
Read the polygon describing the region of validity for the Exposure.
Filter readFilter()
Read the Exposure's filter.
Image< ImagePixelT > readImage(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Read the image plane.
ExposureFitsReader(ExposureFitsReader const &)=delete
std::string readVarianceDType() const
Read a string describing the pixel type of the on-disk image plane.
ndarray::Array< ImagePixelT, 2, 2 > readImageArray(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Read the image plane.
lsst::geom::Box2I readBBox(ImageOrigin origin=PARENT)
Read the bounding box of the on-disk image.
Image< VariancePixelT > readVariance(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Read the variance plane.
std::shared_ptr< daf::base::PropertyList > readMetadata()
Read the flexible metadata associated with the Exposure.
std::shared_ptr< PhotoCalib > readPhotoCalib()
Read the Exposure's photometric calibration.
std::optional< table::RecordId > readExposureId()
Read the Exposure's exposure ID, if it exists.
std::shared_ptr< ApCorrMap > readApCorrMap()
Read the Exposure's aperture correction map.
ndarray::Array< MaskPixelT, 2, 2 > readMaskArray(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Read the mask plane.
std::string readImageDType() const
Read a string describing the pixel type of the on-disk image plane.
std::shared_ptr< CoaddInputs > readCoaddInputs()
Read the Exposure's coadd input catalogs.
std::shared_ptr< cameraGeom::Detector > readDetector()
Read the Exposure's detector.
std::shared_ptr< ExposureInfo > readExposureInfo()
Read the ExposureInfo containing all non-image components.
std::shared_ptr< VisitInfo > readVisitInfo()
Read the Exposure's visit metadata.
ExposureFitsReader & operator=(ExposureFitsReader const &)=delete
ExposureFitsReader(ExposureFitsReader &&)=delete
ExposureFitsReader & operator=(ExposureFitsReader &&)=delete
Mask< MaskPixelT > readMask(lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool conformMasks=false, bool allowUnsafe=false)
Read the mask plane.
A class to contain the data, WCS, and other information needed to describe an image of the sky.
Definition: Exposure.h:72
A collection of all the things that make an Exposure different from a MaskedImage.
Definition: ExposureInfo.h:89
A group of labels for a filter in an exposure or coadd.
Definition: FilterLabel.h:58
A class to represent a 2-dimensional array of pixels.
Definition: Image.h:51
Represent a 2-dimensional array of bitmask pixels.
Definition: Mask.h:77
std::string getFileName() const
Return the name of the file this reader targets.
A class to manipulate images, masks, and variance as a single object.
Definition: MaskedImage.h:73
The photometric calibration of an exposure.
Definition: PhotoCalib.h:114
A spatially-varying transmission curve as a function of wavelength.
Information about a single exposure of an imaging camera.
Definition: VisitInfo.h:68
Interface supporting iteration over heterogenous containers.
Definition: Storable.h:58
An integer coordinate rectangle.
Definition: Box.h:55
Backwards-compatibility support for depersisting the old Calib (FluxMag0/FluxMag0Err) objects.
float VariancePixel
default type for MaskedImage variance images
std::int64_t RecordId
Type used for unique IDs for records.
Definition: misc.h:21
Point< int, 2 > Point2I
Definition: Point.h:321
A base class for image defects.
STL namespace.