LSST Applications  21.0.0-172-gfb10e10a+18fedfabac,22.0.0+297cba6710,22.0.0+80564b0ff1,22.0.0+8d77f4f51a,22.0.0+a28f4c53b1,22.0.0+dcf3732eb2,22.0.1-1-g7d6de66+2a20fdde0d,22.0.1-1-g8e32f31+297cba6710,22.0.1-1-geca5380+7fa3b7d9b6,22.0.1-12-g44dc1dc+2a20fdde0d,22.0.1-15-g6a90155+515f58c32b,22.0.1-16-g9282f48+790f5f2caa,22.0.1-2-g92698f7+dcf3732eb2,22.0.1-2-ga9b0f51+7fa3b7d9b6,22.0.1-2-gd1925c9+bf4f0e694f,22.0.1-24-g1ad7a390+a9625a72a8,22.0.1-25-g5bf6245+3ad8ecd50b,22.0.1-25-gb120d7b+8b5510f75f,22.0.1-27-g97737f7+2a20fdde0d,22.0.1-32-gf62ce7b1+aa4237961e,22.0.1-4-g0b3f228+2a20fdde0d,22.0.1-4-g243d05b+871c1b8305,22.0.1-4-g3a563be+32dcf1063f,22.0.1-4-g44f2e3d+9e4ab0f4fa,22.0.1-42-gca6935d93+ba5e5ca3eb,22.0.1-5-g15c806e+85460ae5f3,22.0.1-5-g58711c4+611d128589,22.0.1-5-g75bb458+99c117b92f,22.0.1-6-g1c63a23+7fa3b7d9b6,22.0.1-6-g50866e6+84ff5a128b,22.0.1-6-g8d3140d+720564cf76,22.0.1-6-gd805d02+cc5644f571,22.0.1-8-ge5750ce+85460ae5f3,master-g6e05de7fdc+babf819c66,master-g99da0e417a+8d77f4f51a,w.2021.48
LSST Data Management Base Package
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | List of all members
lsst::afw::table::ExposureCatalogT< RecordT > Class Template Reference

Custom catalog class for ExposureRecord/Table. More...

#include <Exposure.h>

Inheritance diagram for lsst::afw::table::ExposureCatalogT< RecordT >:
lsst::afw::table::SortedCatalogT< RecordT > lsst::afw::table::CatalogT< RecordT >

Public Types

using Record = RecordT
 
using Table = typename Record::Table
 
using iterator = typename Base::iterator
 
using const_iterator = typename Base::const_iterator
 
using ColumnView = typename Record::ColumnView
 
using value_type = RecordT
 
using reference = RecordT &
 
using pointer = std::shared_ptr< RecordT >
 
using size_type = typename Internal::size_type
 
using difference_type = typename Internal::difference_type
 

Public Member Functions

 ExposureCatalogT (std::shared_ptr< Table > const &table=std::shared_ptr< Table >())
 Construct a vector from a table (or nothing). More...
 
 ExposureCatalogT (Schema const &schema)
 Construct a vector from a schema, creating a table with Table::make(schema). More...
 
template<typename InputIterator >
 ExposureCatalogT (std::shared_ptr< Table > const &table, InputIterator first, InputIterator last, bool deep=false)
 Construct a vector from a table and an iterator range. More...
 
template<typename OtherRecordT >
 ExposureCatalogT (ExposureCatalogT< OtherRecordT > const &other)
 Shallow copy constructor from a container containing a related record type. More...
 
 ExposureCatalogT (ExposureCatalogT const &)=default
 
 ExposureCatalogT (ExposureCatalogT &&)=default
 
ExposureCatalogToperator= (ExposureCatalogT const &)=default
 
ExposureCatalogToperator= (ExposureCatalogT &&)=default
 
 ~ExposureCatalogT ()=default
 
void writeFits (fits::Fits &fitsfile, std::shared_ptr< io::OutputArchive > archive, int flags=0) const
 Write a FITS binary table to an open file object. More...
 
void writeToArchive (io::OutputArchiveHandle &handle, bool ignoreUnpersistable=true) const
 Convenience output function for Persistables that contain an ExposureCatalog. More...
 
ExposureCatalogT< RecordT > subset (ndarray::Array< bool const, 1 > const &mask) const
 Return the subset of a catalog corresponding to the True values of the given mask array. More...
 
ExposureCatalogT subset (std::ptrdiff_t startd, std::ptrdiff_t stopd, std::ptrdiff_t step) const
 Shallow copy a subset of another ExposureCatalog. More...
 
ExposureCatalogT subsetContaining (lsst::geom::SpherePoint const &coord, bool includeValidPolygon=false) const
 Return a shallow subset of the catalog with only those records that contain the given point. More...
 
ExposureCatalogT subsetContaining (lsst::geom::Point2D const &point, geom::SkyWcs const &wcs, bool includeValidPolygon=false) const
 Return a shallow subset of the catalog with only those records that contain the given point. More...
 
bool isSorted () const
 Return true if the vector is in ascending ID order. More...
 
template<typename T >
bool isSorted (Key< T > const &key) const
 Return true if the catalog is in ascending order according to the given key. More...
 
template<typename Compare >
bool isSorted (Compare cmp) const
 Return true if the catalog is in ascending order according to the given predicate. More...
 
template<typename T >
bool isSorted (Key< T > const &key) const
 Return true if the catalog is in ascending order according to the given key. More...
 
template<typename Compare >
bool isSorted (Compare cmp) const
 Return true if the catalog is in ascending order according to the given predicate. More...
 
void sort ()
 Sort the vector in-place by ID. More...
 
template<typename T >
void sort (Key< T > const &key)
 Sort the catalog in-place by the field with the given key. More...
 
template<typename Compare >
void sort (Compare cmp)
 Sort the catalog in-place by the field with the given predicate. More...
 
template<typename T >
void sort (Key< T > const &key)
 Sort the catalog in-place by the field with the given key. More...
 
iterator find (RecordId id)
 Return an iterator to the record with the given ID. More...
 
const_iterator find (RecordId id) const
 
template<typename T >
iterator find (typename Field< T >::Value const &value, Key< T > const &key)
 Return an iterator to the record with the given value. More...
 
template<typename T >
const_iterator find (typename Field< T >::Value const &value, Key< T > const &key) const
 
template<typename T >
iterator find (typename Field< T >::Value const &value, Key< T > const &key)
 Return an iterator to the record with the given value. More...
 
template<typename T >
const_iterator find (typename Field< T >::Value const &value, Key< T > const &key) const
 
std::shared_ptr< TablegetTable () const
 Return the table associated with the catalog. More...
 
Schema getSchema () const
 Return the schema associated with the catalog's table. More...
 
void writeFits (std::string const &filename, std::string const &mode="w", int flags=0) const
 Write a FITS binary table to a regular file. More...
 
void writeFits (fits::MemFileManager &manager, std::string const &mode="w", int flags=0) const
 Write a FITS binary table to a RAM file. More...
 
void writeFits (fits::Fits &fitsfile, int flags=0) const
 Write a FITS binary table to an open file object. More...
 
ColumnView getColumnView () const
 Return a ColumnView of this catalog's records. More...
 
bool isContiguous () const
 Return true if all records are contiguous. More...
 
iterator begin ()
 Iterator access. More...
 
const_iterator begin () const
 
iterator end ()
 
const_iterator end () const
 
const_iterator cbegin () const
 
const_iterator cend () const
 
bool empty () const
 Return true if the catalog has no records. More...
 
size_type size () const
 Return the number of elements in the catalog. More...
 
size_type max_size () const
 Return the maximum number of elements allowed in a catalog. More...
 
size_type capacity () const
 Return the capacity of the catalog. More...
 
void reserve (size_type n)
 Increase the capacity of the catalog to the given size. More...
 
void resize (size_type n)
 Change the size of the catalog, removing or adding empty records as needed. More...
 
reference operator[] (size_type i) const
 Return the record at index i. More...
 
reference at (size_type i) const
 Return the record at index i (throws std::out_of_range). More...
 
reference front () const
 Return the first record. More...
 
reference back () const
 Return the last record. More...
 
std::shared_ptr< RecordT > const get (size_type i) const
 Return a pointer to the record at index i. More...
 
void set (size_type i, std::shared_ptr< RecordT > const &p)
 Set the record at index i to a pointer. More...
 
template<typename InputIterator >
void assign (InputIterator first, InputIterator last, bool deep=false)
 Replace the contents of the table with an iterator range. More...
 
void push_back (Record const &r)
 Add a copy of the given record to the end of the catalog. More...
 
void push_back (std::shared_ptr< RecordT > const &p)
 Add the given record to the end of the catalog without copying. More...
 
std::shared_ptr< RecordT > addNew ()
 Create a new record, add it to the end of the catalog, and return a pointer to it. More...
 
void pop_back ()
 Remove the last record in the catalog. More...
 
CatalogT copy () const
 Deep-copy the catalog using a cloned table. More...
 
template<typename InputIterator >
void insert (iterator pos, InputIterator first, InputIterator last, bool deep=false)
 Insert an iterator range into the table. More...
 
template<typename InputIterator >
void insert (SchemaMapper const &mapper, iterator pos, InputIterator first, InputIterator last)
 Insert a range of records into the catalog by copying them with a SchemaMapper. More...
 
iterator insert (iterator pos, Record const &r)
 Insert a copy of the given record at the given position. More...
 
iterator insert (iterator pos, std::shared_ptr< RecordT > const &p)
 Insert the given record at the given position without copying. More...
 
iterator erase (iterator pos)
 Erase the record pointed to by pos, and return an iterator the next record. More...
 
iterator erase (iterator first, iterator last)
 Erase the records in the range [first, last). More...
 
void swap (CatalogT &other) noexcept
 Shallow swap of two catalogs. More...
 
void clear ()
 Remove all records from the catalog. More...
 
template<typename T >
iterator lower_bound (typename Field< T >::Value const &value, Key< T > const &key)
 Performed binary searches on sorted fields. More...
 
template<typename T >
const_iterator lower_bound (typename Field< T >::Value const &value, Key< T > const &key) const
 
template<typename T >
iterator upper_bound (typename Field< T >::Value const &value, Key< T > const &key)
 
template<typename T >
const_iterator upper_bound (typename Field< T >::Value const &value, Key< T > const &key) const
 
template<typename T >
std::pair< iterator, iteratorequal_range (typename Field< T >::Value const &value, Key< T > const &key)
 
template<typename T >
std::pair< const_iterator, const_iteratorequal_range (typename Field< T >::Value const &value, Key< T > const &key) const
 
template<typename T >
std::pair< typename CatalogT< RecordT >::iterator, typename CatalogT< RecordT >::iteratorequal_range (typename Field< T >::Value const &value, Key< T > const &key)
 
template<typename T >
std::pair< typename CatalogT< RecordT >::const_iterator, typename CatalogT< RecordT >::const_iteratorequal_range (typename Field< T >::Value const &value, Key< T > const &key) const
 
InternalgetInternal ()
 Return a reference to the internal vector-of-shared_ptr. More...
 
Internal const & getInternal () const
 

Static Public Member Functions

static ExposureCatalogT readFits (std::string const &filename, int hdu=fits::DEFAULT_HDU, int flags=0)
 Read a FITS binary table from a regular file. More...
 
static ExposureCatalogT readFits (fits::MemFileManager &manager, int hdu=fits::DEFAULT_HDU, int flags=0)
 Read a FITS binary table from a RAM file. More...
 
static ExposureCatalogT readFits (fits::Fits &fitsfile, int flags=0)
 Read a FITS binary table from a file object already at the correct extension. More...
 
static ExposureCatalogT readFits (fits::Fits &fitsfile, std::shared_ptr< io::InputArchive > archive, int flags=0)
 Read a FITS binary table from a file object already at the correct extension. More...
 
static ExposureCatalogT readFromArchive (io::InputArchive const &archive, BaseCatalog const &catalog)
 Convenience input function for Persistables that contain an ExposureCatalog. More...
 

Protected Member Functions

 ExposureCatalogT (Base const &other)
 

Detailed Description

template<typename RecordT>
class lsst::afw::table::ExposureCatalogT< RecordT >

Custom catalog class for ExposureRecord/Table.

We don't expect to subclass ExposureRecord/Table, so unlike other Catalogs we can (and do) define some ExposureCatalogT member functions in Exposure.cc where the explicit instantiation is done.

Definition at line 311 of file Exposure.h.

Member Typedef Documentation

◆ ColumnView

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::ColumnView = typename Record::ColumnView
inherited

Definition at line 104 of file Catalog.h.

◆ const_iterator

template<typename RecordT >
using lsst::afw::table::ExposureCatalogT< RecordT >::const_iterator = typename Base::const_iterator

Definition at line 319 of file Exposure.h.

◆ difference_type

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::difference_type = typename Internal::difference_type
inherited

Definition at line 110 of file Catalog.h.

◆ iterator

template<typename RecordT >
using lsst::afw::table::ExposureCatalogT< RecordT >::iterator = typename Base::iterator

Definition at line 318 of file Exposure.h.

◆ pointer

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::pointer = std::shared_ptr<RecordT>
inherited

Definition at line 108 of file Catalog.h.

◆ Record

template<typename RecordT >
using lsst::afw::table::ExposureCatalogT< RecordT >::Record = RecordT

Definition at line 315 of file Exposure.h.

◆ reference

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::reference = RecordT &
inherited

Definition at line 107 of file Catalog.h.

◆ size_type

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::size_type = typename Internal::size_type
inherited

Definition at line 109 of file Catalog.h.

◆ Table

template<typename RecordT >
using lsst::afw::table::ExposureCatalogT< RecordT >::Table = typename Record::Table

Definition at line 316 of file Exposure.h.

◆ value_type

template<typename RecordT >
using lsst::afw::table::CatalogT< RecordT >::value_type = RecordT
inherited

Definition at line 106 of file Catalog.h.

Constructor & Destructor Documentation

◆ ExposureCatalogT() [1/7]

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( std::shared_ptr< Table > const &  table = std::shared_ptr<Table>())
inlineexplicit

Construct a vector from a table (or nothing).

A vector with no table is considered invalid; a valid table must be assigned to it before it can be used.

Definition at line 327 of file Exposure.h.

327 : Base(table) {}

◆ ExposureCatalogT() [2/7]

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( Schema const &  schema)
inlineexplicit

Construct a vector from a schema, creating a table with Table::make(schema).

Definition at line 330 of file Exposure.h.

330 : Base(schema) {}
table::Schema schema
Definition: python.h:134

◆ ExposureCatalogT() [3/7]

template<typename RecordT >
template<typename InputIterator >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( std::shared_ptr< Table > const &  table,
InputIterator  first,
InputIterator  last,
bool  deep = false 
)
inline

Construct a vector from a table and an iterator range.

If deep is true, new records will be created using table->copyRecord before being inserted. If deep is false, records will be not be copied, but they must already be associated with the given table. The table itself is never deep-copied.

The iterator must dereference to a record reference or const reference rather than a pointer, but should be implicitly convertible to a record pointer as well (see CatalogIterator).

Definition at line 343 of file Exposure.h.

345  : Base(table, first, last, deep) {}

◆ ExposureCatalogT() [4/7]

template<typename RecordT >
template<typename OtherRecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( ExposureCatalogT< OtherRecordT > const &  other)
inline

Shallow copy constructor from a container containing a related record type.

This conversion only succeeds if OtherRecordT is convertible to RecordT and OtherTable is convertible to Table.

Definition at line 354 of file Exposure.h.

354 : Base(other) {}

◆ ExposureCatalogT() [5/7]

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( ExposureCatalogT< RecordT > const &  )
default

◆ ExposureCatalogT() [6/7]

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( ExposureCatalogT< RecordT > &&  )
default

◆ ~ExposureCatalogT()

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::~ExposureCatalogT ( )
default

◆ ExposureCatalogT() [7/7]

template<typename RecordT >
lsst::afw::table::ExposureCatalogT< RecordT >::ExposureCatalogT ( Base const &  other)
inlineexplicitprotected

Definition at line 485 of file Exposure.h.

485 : Base(other) {}

Member Function Documentation

◆ addNew()

template<typename RecordT >
std::shared_ptr<RecordT> lsst::afw::table::CatalogT< RecordT >::addNew ( )
inlineinherited

Create a new record, add it to the end of the catalog, and return a pointer to it.

Definition at line 490 of file Catalog.h.

490  {
491  std::shared_ptr<RecordT> r = _table->makeRecord();
492  _internal.push_back(r);
493  return r;
494  }
T push_back(T... args)

◆ assign()

template<typename RecordT >
template<typename InputIterator >
void lsst::afw::table::CatalogT< RecordT >::assign ( InputIterator  first,
InputIterator  last,
bool  deep = false 
)
inlineinherited

Replace the contents of the table with an iterator range.

Delegates to insert(); look there for more information.

Definition at line 475 of file Catalog.h.

475  {
476  clear();
477  insert(end(), first, last, deep);
478  }
void clear()
Remove all records from the catalog.
Definition: Catalog.h:579
void insert(iterator pos, InputIterator first, InputIterator last, bool deep=false)
Insert an iterator range into the table.
Definition: Catalog.h:518

◆ at()

template<typename RecordT >
reference lsst::afw::table::CatalogT< RecordT >::at ( size_type  i) const
inlineinherited

Return the record at index i (throws std::out_of_range).

Definition at line 455 of file Catalog.h.

455 { return *_internal.at(i); }
T at(T... args)

◆ back()

template<typename RecordT >
reference lsst::afw::table::CatalogT< RecordT >::back ( ) const
inlineinherited

Return the last record.

Definition at line 461 of file Catalog.h.

461 { return *_internal.back(); }
T back(T... args)

◆ begin() [1/2]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::begin ( )
inlineinherited

Iterator access.

See also
CatalogIterator

Definition at line 401 of file Catalog.h.

401 { return iterator(_internal.begin()); }
T begin(T... args)
CatalogIterator< typename Internal::iterator > iterator
Definition: Catalog.h:111

◆ begin() [2/2]

template<typename RecordT >
const_iterator lsst::afw::table::CatalogT< RecordT >::begin ( ) const
inlineinherited

Definition at line 403 of file Catalog.h.

403 { return const_iterator(_internal.begin()); }
CatalogIterator< typename Internal::const_iterator > const_iterator
Definition: Catalog.h:112

◆ capacity()

template<typename RecordT >
size_type lsst::afw::table::CatalogT< RecordT >::capacity ( ) const
inlineinherited

Return the capacity of the catalog.

This is computed as the sum of the current size and the unallocated space in the table. It does not reflect the size of the internal vector, and hence cannot be used to judge when iterators may be invalidated.

Definition at line 425 of file Catalog.h.

425 { return _internal.size() + _table->getBufferSize(); }
T size(T... args)

◆ cbegin()

template<typename RecordT >
const_iterator lsst::afw::table::CatalogT< RecordT >::cbegin ( ) const
inlineinherited

Definition at line 405 of file Catalog.h.

405 { return begin(); }
iterator begin()
Iterator access.
Definition: Catalog.h:401

◆ cend()

template<typename RecordT >
const_iterator lsst::afw::table::CatalogT< RecordT >::cend ( ) const
inlineinherited

Definition at line 406 of file Catalog.h.

406 { return end(); }

◆ clear()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::clear ( )
inlineinherited

Remove all records from the catalog.

Definition at line 579 of file Catalog.h.

579 { _internal.clear(); }
T clear(T... args)

◆ copy()

template<typename RecordT >
CatalogT lsst::afw::table::CatalogT< RecordT >::copy ( ) const
inlineinherited

Deep-copy the catalog using a cloned table.

Definition at line 500 of file Catalog.h.

500 { return CatalogT(getTable()->clone(), begin(), end(), true); }
CatalogT(std::shared_ptr< Table > const &table=std::shared_ptr< Table >())
Construct a catalog from a table (or nothing).
Definition: Catalog.h:125
std::shared_ptr< Table > getTable() const
Return the table associated with the catalog.
Definition: Catalog.h:115

◆ empty()

template<typename RecordT >
bool lsst::afw::table::CatalogT< RecordT >::empty ( ) const
inlineinherited

Return true if the catalog has no records.

Definition at line 410 of file Catalog.h.

410 { return _internal.empty(); }
T empty(T... args)

◆ end() [1/2]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::end ( )
inlineinherited

Definition at line 402 of file Catalog.h.

402 { return iterator(_internal.end()); }
T end(T... args)

◆ end() [2/2]

template<typename RecordT >
const_iterator lsst::afw::table::CatalogT< RecordT >::end ( ) const
inlineinherited

Definition at line 404 of file Catalog.h.

404 { return const_iterator(_internal.end()); }

◆ equal_range() [1/4]

template<typename RecordT >
template<typename T >
std::pair<iterator, iterator> lsst::afw::table::CatalogT< RecordT >::equal_range ( typename Field< T >::Value const &  value,
Key< T > const &  key 
)
inherited

◆ equal_range() [2/4]

template<typename RecordT >
template<typename T >
std::pair<typename CatalogT<RecordT>::iterator, typename CatalogT<RecordT>::iterator> lsst::afw::table::CatalogT< RecordT >::equal_range ( typename Field< T >::Value const &  value,
Key< T > const &  key 
)
inherited

Definition at line 850 of file Catalog.h.

850  {
851  detail::KeyExtractionFunctor<RecordT, T> f = {key};
852  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
853  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, iterator>;
855  std::equal_range(SearchIter(begin(), f), SearchIter(end(), f), value);
856  return std::make_pair(i.first.base(), i.second.base());
857 }
T equal_range(T... args)
T make_pair(T... args)

◆ equal_range() [3/4]

template<typename RecordT >
template<typename T >
std::pair<const_iterator, const_iterator> lsst::afw::table::CatalogT< RecordT >::equal_range ( typename Field< T >::Value const &  value,
Key< T > const &  key 
) const
inherited

◆ equal_range() [4/4]

template<typename RecordT >
template<typename T >
std::pair<typename CatalogT<RecordT>::const_iterator, typename CatalogT<RecordT>::const_iterator> lsst::afw::table::CatalogT< RecordT >::equal_range ( typename Field< T >::Value const &  value,
Key< T > const &  key 
) const
inherited

Definition at line 862 of file Catalog.h.

862  {
863  detail::KeyExtractionFunctor<RecordT, T> f = {key};
864  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
865  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, const_iterator>;
867  std::equal_range(SearchIter(begin(), f), SearchIter(end(), f), value);
868  return std::make_pair(i.first.base(), i.second.base());
869 }

◆ erase() [1/2]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::erase ( iterator  first,
iterator  last 
)
inlineinherited

Erase the records in the range [first, last).

Definition at line 568 of file Catalog.h.

568  {
569  return iterator(_internal.erase(first.base(), last.base()));
570  }
T erase(T... args)

◆ erase() [2/2]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::erase ( iterator  pos)
inlineinherited

Erase the record pointed to by pos, and return an iterator the next record.

Definition at line 565 of file Catalog.h.

565 { return iterator(_internal.erase(pos.base())); }

◆ find() [1/6]

template<typename RecordT >
iterator lsst::afw::table::SortedCatalogT< RecordT >::find ( RecordId  id)
inlineinherited

Return an iterator to the record with the given ID.

Note
The vector must be sorted in ascending ID order before calling find (i.e. isSorted() must be true).

Returns end() if the Record cannot be found.

Definition at line 77 of file SortedCatalog.h.

77 { return this->find(id, Table::getIdKey()); }
iterator find(RecordId id)
Return an iterator to the record with the given ID.
Definition: SortedCatalog.h:77

◆ find() [2/6]

template<typename RecordT >
const_iterator lsst::afw::table::SortedCatalogT< RecordT >::find ( RecordId  id) const
inlineinherited

Definition at line 78 of file SortedCatalog.h.

78 { return this->find(id, Table::getIdKey()); }

◆ find() [3/6]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::iterator lsst::afw::table::CatalogT< RecordT >::find ( typename Field< T >::Value const &  value,
Key< T > const &  key 
)
inherited

Return an iterator to the record with the given value.

When the field being searched is not unique, which matching record will be returned is not defined. In these cases, lower_bound, upper_bound, or equal_range should be used instead.

In Python, this method returns a Record, not an iterator.

Note
The catalog must be sorted in ascending order according to the given key before calling find (i.e. isSorted(key) must be true) for maximal efficiency. If the value searched for is not found, it assumes that the catalog is unsorted and performs a brute-force search instead of failing immediately.

Returns end() if the Record cannot be found.

Definition at line 763 of file Catalog.h.

764  {
765  detail::KeyExtractionFunctor<RecordT, T> f = {key};
766  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
767  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, iterator>;
768  /* Try binary search for log n search assuming the table is sorted.
769  * If the search is unsuccessful, try a brute-force search before quitting.
770  */
771  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
772  if (i.base() == end() || *i != value) {
773  i = std::find(SearchIter(begin(), f), SearchIter(end(), f), value);
774  if (i.base() == end()) {
775  return end();
776  }
777  LOGL_DEBUG("lsst.afw.table.Catalog", "Catalog is not sorted by the key. Finding a record may be slow.");
778  }
779  return i.base();
780 }
#define LOGL_DEBUG(logger, message...)
Log a debug-level message using a varargs/printf style interface.
Definition: Log.h:515
T find(T... args)
T lower_bound(T... args)

◆ find() [4/6]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::iterator lsst::afw::table::CatalogT< RecordT >::find ( typename T  )
inherited

Return an iterator to the record with the given value.

When the field being searched is not unique, which matching record will be returned is not defined. In these cases, lower_bound, upper_bound, or equal_range should be used instead.

In Python, this method returns a Record, not an iterator.

Note
The catalog must be sorted in ascending order according to the given key before calling find (i.e. isSorted(key) must be true) for maximal efficiency. If the value searched for is not found, it assumes that the catalog is unsorted and performs a brute-force search instead of failing immediately.

Returns end() if the Record cannot be found.

Definition at line 623 of file Catalog.h.

764  {
765  detail::KeyExtractionFunctor<RecordT, T> f = {key};
766  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
767  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, iterator>;
768  /* Try binary search for log n search assuming the table is sorted.
769  * If the search is unsuccessful, try a brute-force search before quitting.
770  */
771  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
772  if (i.base() == end() || *i != value) {
773  i = std::find(SearchIter(begin(), f), SearchIter(end(), f), value);
774  if (i.base() == end()) {
775  return end();
776  }
777  LOGL_DEBUG("lsst.afw.table.Catalog", "Catalog is not sorted by the key. Finding a record may be slow.");
778  }
779  return i.base();
780 }
typename Base::iterator iterator
Definition: SortedCatalog.h:49

◆ find() [5/6]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::const_iterator lsst::afw::table::CatalogT< RecordT >::find ( typename Field< T >::Value const &  value,
Key< T > const &  key 
) const
inherited

Definition at line 784 of file Catalog.h.

785  {
786  detail::KeyExtractionFunctor<RecordT, T> f = {key};
787  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
788  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, const_iterator>;
789  /* Try binary search for log n search assuming the table is sorted.
790  * If the search is unsuccessful, try a brute-force search before quitting.
791  */
792  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
793  if (i.base() == end() || *i != value) {
794  i = std::find(SearchIter(begin(), f), SearchIter(end(), f), value);
795  if (i.base() == end()) {
796  return end();
797  }
798  LOGL_DEBUG("lsst.afw.table.Catalog", "Catalog is not sorted by the key. Finding a record may be slow.");
799  }
800  return i.base();
801 }

◆ find() [6/6]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::const_iterator lsst::afw::table::CatalogT< RecordT >::find ( typename T  )
inherited

Definition at line 626 of file Catalog.h.

785  {
786  detail::KeyExtractionFunctor<RecordT, T> f = {key};
787  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
788  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, const_iterator>;
789  /* Try binary search for log n search assuming the table is sorted.
790  * If the search is unsuccessful, try a brute-force search before quitting.
791  */
792  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
793  if (i.base() == end() || *i != value) {
794  i = std::find(SearchIter(begin(), f), SearchIter(end(), f), value);
795  if (i.base() == end()) {
796  return end();
797  }
798  LOGL_DEBUG("lsst.afw.table.Catalog", "Catalog is not sorted by the key. Finding a record may be slow.");
799  }
800  return i.base();
801 }
typename Base::const_iterator const_iterator
Definition: SortedCatalog.h:50

◆ front()

template<typename RecordT >
reference lsst::afw::table::CatalogT< RecordT >::front ( ) const
inlineinherited

Return the first record.

Definition at line 458 of file Catalog.h.

458 { return *_internal.front(); }
T front(T... args)

◆ get()

template<typename RecordT >
std::shared_ptr<RecordT> const lsst::afw::table::CatalogT< RecordT >::get ( size_type  i) const
inlineinherited

Return a pointer to the record at index i.

Definition at line 464 of file Catalog.h.

464 { return _internal[i]; }

◆ getColumnView()

template<typename RecordT >
ColumnView lsst::afw::table::CatalogT< RecordT >::getColumnView ( ) const
inlineinherited

Return a ColumnView of this catalog's records.

Will throw RuntimeError if records are not contiguous.

Definition at line 382 of file Catalog.h.

382  {
384  throw LSST_EXCEPT(
385  pex::exceptions::LogicError,
386  "Cannot get a column view from a CatalogT<RecordT const> (as column views are always "
387  "non-const views).");
388  }
389  return ColumnView::make(_table, begin(), end());
390  }
#define LSST_EXCEPT(type,...)
Create an exception with a given type.
Definition: Exception.h:48

◆ getInternal() [1/2]

template<typename RecordT >
Internal& lsst::afw::table::CatalogT< RecordT >::getInternal ( )
inlineinherited

Return a reference to the internal vector-of-shared_ptr.

While in most cases it is more convenient to use the Catalog's iterators, which dereference directly to Record objects (and hence allow iter->method() rather than (**iter).method()), direct access to the underlying vector-of-shared_ptr is provided here to allow complete use of the C++ STL. In particular, in order to use a mutating STL algorithm on a Catalog in such a way that Records are shallow-copied (i.e. shared_ptr::operator= is invoked instead of Record::operator=), those algorithms should be called on the iterators of these internal containers. When an algorithm should be called in such a way that records are deep-copied, the regular Catalog iterators should be used.

Definition at line 676 of file Catalog.h.

676 { return _internal; }

◆ getInternal() [2/2]

template<typename RecordT >
Internal const& lsst::afw::table::CatalogT< RecordT >::getInternal ( ) const
inlineinherited

Definition at line 677 of file Catalog.h.

677 { return _internal; }

◆ getSchema()

template<typename RecordT >
Schema lsst::afw::table::CatalogT< RecordT >::getSchema ( ) const
inlineinherited

Return the schema associated with the catalog's table.

Definition at line 118 of file Catalog.h.

118 { return _table->getSchema(); }

◆ getTable()

template<typename RecordT >
std::shared_ptr<Table> lsst::afw::table::CatalogT< RecordT >::getTable ( ) const
inlineinherited

Return the table associated with the catalog.

Definition at line 115 of file Catalog.h.

115 { return _table; }

◆ insert() [1/4]

template<typename RecordT >
template<typename InputIterator >
void lsst::afw::table::CatalogT< RecordT >::insert ( iterator  pos,
InputIterator  first,
InputIterator  last,
bool  deep = false 
)
inlineinherited

Insert an iterator range into the table.

InputIterator must dereference to a record reference that is convertible to the record type held by the catalog, and must be implicitly convertible to a shared_ptr to a record.

If deep is true, new records will be created by calling copyRecord on the catalog's table. If deep is false, the new records will not be copied, but they must have been created with the catalog's table (note that a table may be shared by multiple catalogs).

If InputIterator models RandomAccessIterator (according to std::iterator_traits) and deep is true, table->preallocate will be used to ensure that the resulting records are contiguous in memory and can be used with ColumnView. To ensure this is the case for other iterator types, the user must preallocate the table manually.

Definition at line 518 of file Catalog.h.

518  {
519  _maybeReserve(pos, first, last, deep,
521  if (deep) {
522  while (first != last) {
523  pos = insert(pos, *first);
524  ++pos;
525  ++first;
526  }
527  } else {
528  while (first != last) {
529  pos = insert(pos, first);
530  assert(pos != end());
531  ++pos;
532  ++first;
533  }
534  }
535  }

◆ insert() [2/4]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::insert ( iterator  pos,
Record const &  r 
)
inlineinherited

Insert a copy of the given record at the given position.

Definition at line 554 of file Catalog.h.

554  {
555  std::shared_ptr<RecordT> p = _table->copyRecord(r);
556  return iterator(_internal.insert(pos.base(), p));
557  }
T insert(T... args)

◆ insert() [3/4]

template<typename RecordT >
iterator lsst::afw::table::CatalogT< RecordT >::insert ( iterator  pos,
std::shared_ptr< RecordT > const &  p 
)
inlineinherited

Insert the given record at the given position without copying.

Definition at line 560 of file Catalog.h.

560  {
561  return iterator(_internal.insert(pos.base(), p));
562  }

◆ insert() [4/4]

template<typename RecordT >
template<typename InputIterator >
void lsst::afw::table::CatalogT< RecordT >::insert ( SchemaMapper const &  mapper,
iterator  pos,
InputIterator  first,
InputIterator  last 
)
inlineinherited

Insert a range of records into the catalog by copying them with a SchemaMapper.

Definition at line 539 of file Catalog.h.

539  {
540  if (!_table->getSchema().contains(mapper.getOutputSchema())) {
541  throw LSST_EXCEPT(pex::exceptions::InvalidParameterError,
542  "SchemaMapper's output schema does not match catalog's schema");
543  }
544  _maybeReserve(pos, first, last, true,
546  while (first != last) {
547  pos = insert(pos, _table->copyRecord(*first, mapper));
548  ++pos;
549  ++first;
550  }
551  }
SchemaMapper * mapper
Definition: SchemaMapper.cc:71

◆ isContiguous()

template<typename RecordT >
bool lsst::afw::table::CatalogT< RecordT >::isContiguous ( ) const
inlineinherited

Return true if all records are contiguous.

Definition at line 393 of file Catalog.h.

393 { return ColumnView::isRangeContiguous(_table, begin(), end()); }

◆ isSorted() [1/5]

template<typename RecordT >
bool lsst::afw::table::SortedCatalogT< RecordT >::isSorted ( ) const
inlineinherited

Return true if the vector is in ascending ID order.

Definition at line 63 of file SortedCatalog.h.

63 { return this->isSorted(Table::getIdKey()); }
bool isSorted() const
Return true if the vector is in ascending ID order.
Definition: SortedCatalog.h:63

◆ isSorted() [2/5]

template<typename RecordT >
template<typename Compare >
bool lsst::afw::table::CatalogT< RecordT >::isSorted ( Compare  cmp) const
inherited

Return true if the catalog is in ascending order according to the given predicate.

cmp(a, b) should return true if record a is less than record b, and false otherwise.

TODO: C++11 has an is_sorted function we should use when available.

Definition at line 726 of file Catalog.h.

726  {
728  detail::ComparisonAdaptor<RecordT, Compare> f = {cmp};
729  if (empty()) return true;
730  const_iterator last = this->begin();
731  const_iterator i = last;
732  ++i;
733  for (; i != this->end(); ++i) {
734  if (f(i, last)) return false;
735  last = i;
736  }
737  return true;
738 }
bool empty() const
Return true if the catalog has no records.
Definition: Catalog.h:410

◆ isSorted() [3/5]

template<typename RecordT >
template<typename Compare >
bool lsst::afw::table::CatalogT< RecordT >::isSorted ( typename Compare  )
inherited

Return true if the catalog is in ascending order according to the given predicate.

cmp(a, b) should return true if record a is less than record b, and false otherwise.

TODO: C++11 has an is_sorted function we should use when available.

Definition at line 591 of file Catalog.h.

726  {
728  detail::ComparisonAdaptor<RecordT, Compare> f = {cmp};
729  if (empty()) return true;
730  const_iterator last = this->begin();
731  const_iterator i = last;
732  ++i;
733  for (; i != this->end(); ++i) {
734  if (f(i, last)) return false;
735  last = i;
736  }
737  return true;
738 }

◆ isSorted() [4/5]

template<typename RecordT >
template<typename T >
bool lsst::afw::table::CatalogT< RecordT >::isSorted ( Key< T > const &  key) const
inherited

Return true if the catalog is in ascending order according to the given key.

Definition at line 749 of file Catalog.h.

749  {
750  detail::KeyComparisonFunctor<RecordT, T> f = {key};
751  return isSorted(f);
752 }
bool isSorted(Key< T > const &key) const
Return true if the catalog is in ascending order according to the given key.
Definition: Catalog.h:749

◆ isSorted() [5/5]

template<typename RecordT >
template<typename T >
bool lsst::afw::table::CatalogT< RecordT >::isSorted ( typename T  )
inherited

Return true if the catalog is in ascending order according to the given key.

Definition at line 583 of file Catalog.h.

749  {
750  detail::KeyComparisonFunctor<RecordT, T> f = {key};
751  return isSorted(f);
752 }

◆ lower_bound() [1/2]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::iterator lsst::afw::table::CatalogT< RecordT >::lower_bound ( typename Field< T >::Value const &  value,
Key< T > const &  key 
)
inherited

Performed binary searches on sorted fields.

These methods perform binary searches analogous to the STL algorithms of the same name; they simply create a comparison functor using the given value and Key.

In Python, the lower_bound and upper_bound methods return the position of the result record in the catalog, and equal_range returns a Python slice object that defines the range.

Note
The catalog must be sorted in ascending order according to the given key before calling any of the search methods (i.e. isSorted(key) must be true).

Definition at line 805 of file Catalog.h.

806  {
807  detail::KeyExtractionFunctor<RecordT, T> f = {key};
808  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
809  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, iterator>;
810  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
811  return i.base();
812 }

◆ lower_bound() [2/2]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::const_iterator lsst::afw::table::CatalogT< RecordT >::lower_bound ( typename Field< T >::Value const &  value,
Key< T > const &  key 
) const
inherited

Definition at line 816 of file Catalog.h.

817  {
818  detail::KeyExtractionFunctor<RecordT, T> f = {key};
819  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
820  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, const_iterator>;
821  SearchIter i = std::lower_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
822  return i.base();
823 }

◆ max_size()

template<typename RecordT >
size_type lsst::afw::table::CatalogT< RecordT >::max_size ( ) const
inlineinherited

Return the maximum number of elements allowed in a catalog.

Definition at line 416 of file Catalog.h.

416 { return _internal.max_size(); }
T max_size(T... args)

◆ operator=() [1/2]

template<typename RecordT >
ExposureCatalogT& lsst::afw::table::ExposureCatalogT< RecordT >::operator= ( ExposureCatalogT< RecordT > &&  )
default

◆ operator=() [2/2]

template<typename RecordT >
ExposureCatalogT& lsst::afw::table::ExposureCatalogT< RecordT >::operator= ( ExposureCatalogT< RecordT > const &  )
default

◆ operator[]()

template<typename RecordT >
reference lsst::afw::table::CatalogT< RecordT >::operator[] ( size_type  i) const
inlineinherited

Return the record at index i.

Definition at line 452 of file Catalog.h.

452 { return *_internal[i]; }

◆ pop_back()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::pop_back ( )
inlineinherited

Remove the last record in the catalog.

Definition at line 497 of file Catalog.h.

497 { _internal.pop_back(); }
T pop_back(T... args)

◆ push_back() [1/2]

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::push_back ( Record const &  r)
inlineinherited

Add a copy of the given record to the end of the catalog.

Definition at line 481 of file Catalog.h.

481  {
482  std::shared_ptr<RecordT> p = _table->copyRecord(r);
483  _internal.push_back(p);
484  }

◆ push_back() [2/2]

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::push_back ( std::shared_ptr< RecordT > const &  p)
inlineinherited

Add the given record to the end of the catalog without copying.

Definition at line 487 of file Catalog.h.

487 { _internal.push_back(p); }

◆ readFits() [1/4]

template<typename RecordT >
static ExposureCatalogT lsst::afw::table::ExposureCatalogT< RecordT >::readFits ( fits::Fits fitsfile,
int  flags = 0 
)
inlinestatic

Read a FITS binary table from a file object already at the correct extension.

Parameters
[in]fitsfileFits file object to read from.
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalog. See e.g. SourceFitsFlags.

Definition at line 413 of file Exposure.h.

413  {
414  return io::FitsReader::apply<ExposureCatalogT>(fitsfile, flags);
415  }

◆ readFits() [2/4]

template<typename RecordT >
static ExposureCatalogT lsst::afw::table::ExposureCatalogT< RecordT >::readFits ( fits::Fits fitsfile,
std::shared_ptr< io::InputArchive archive,
int  flags = 0 
)
inlinestatic

Read a FITS binary table from a file object already at the correct extension.

This overload reads nested Persistables from the given archive instead of loading a new archive from the HDUs following the catalog.

Definition at line 423 of file Exposure.h.

424  {
425  return io::FitsReader::apply<ExposureCatalogT>(fitsfile, flags, archive);
426  }

◆ readFits() [3/4]

template<typename RecordT >
static ExposureCatalogT lsst::afw::table::ExposureCatalogT< RecordT >::readFits ( fits::MemFileManager manager,
int  hdu = fits::DEFAULT_HDU,
int  flags = 0 
)
inlinestatic

Read a FITS binary table from a RAM file.

Parameters
[in]managerObject that manages the memory to be read.
[in]hduNumber of the "header-data unit" to read (where 0 is the Primary HDU). The default value of afw::fits::DEFAULT_HDU is interpreted as "the first HDU with NAXIS != 0".
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalog. See e.g. SourceFitsFlags.

Definition at line 401 of file Exposure.h.

402  {
403  return io::FitsReader::apply<ExposureCatalogT>(manager, hdu, flags);
404  }

◆ readFits() [4/4]

template<typename RecordT >
static ExposureCatalogT lsst::afw::table::ExposureCatalogT< RecordT >::readFits ( std::string const &  filename,
int  hdu = fits::DEFAULT_HDU,
int  flags = 0 
)
inlinestatic

Read a FITS binary table from a regular file.

Parameters
[in]filenameName of the file to read.
[in]hduNumber of the "header-data unit" to read (where 0 is the Primary HDU). The default value of afw::fits::DEFAULT_HDU is interpreted as "the first HDU with NAXIS != 0".
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalog. See e.g. SourceFitsFlags.

Definition at line 386 of file Exposure.h.

387  {
388  return io::FitsReader::apply<ExposureCatalogT>(filename, hdu, flags);
389  }

◆ readFromArchive()

template<typename RecordT >
ExposureCatalogT< RecordT > lsst::afw::table::ExposureCatalogT< RecordT >::readFromArchive ( io::InputArchive const &  archive,
BaseCatalog const &  catalog 
)
static

Convenience input function for Persistables that contain an ExposureCatalog.

Unlike the FITS read methods, this reader is not polymorphically aware - it always tries to create an ExposureTable rather than infer the type of table from the data.

Definition at line 456 of file Exposure.cc.

457  {
458  // Helper constructor will infer which components are available
459  // (effectively the version, but more flexible).
460  PersistenceHelper helper{catalog.getSchema()};
461  SchemaMapper mapper = helper.makeReadMapper(catalog.getSchema());
462  ExposureCatalogT<ExposureRecord> result(mapper.getOutputSchema());
463  result.reserve(catalog.size());
464  for (BaseCatalog::const_iterator i = catalog.begin(); i != catalog.end(); ++i) {
465  helper.readRecord(*i, *result.addNew(), mapper, archive);
466  }
467  return result;
468 }
py::object result
Definition: _schema.cc:429

◆ reserve()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::reserve ( size_type  n)
inlineinherited

Increase the capacity of the catalog to the given size.

This can be used to guarantee that the catalog will be contiguous, but it only affects records constructed after reserve().

Definition at line 433 of file Catalog.h.

433  {
434  if (n <= _internal.size()) return;
435  _table->preallocate(n - _internal.size());
436  _internal.reserve(n);
437  }
T reserve(T... args)

◆ resize()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::resize ( size_type  n)
inlineinherited

Change the size of the catalog, removing or adding empty records as needed.

Definition at line 440 of file Catalog.h.

440  {
441  size_type old = size();
442  _internal.resize(n);
443  if (old < n) {
444  _table->preallocate(n - old);
445  for (size_type i = old; i != n; ++i) {
446  _internal[i] = _table->makeRecord();
447  }
448  }
449  }
size_type size() const
Return the number of elements in the catalog.
Definition: Catalog.h:413
typename Internal::size_type size_type
Definition: Catalog.h:109
T resize(T... args)

◆ set()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::set ( size_type  i,
std::shared_ptr< RecordT > const &  p 
)
inlineinherited

Set the record at index i to a pointer.

Definition at line 467 of file Catalog.h.

467 { _internal[i] = p; }

◆ size()

template<typename RecordT >
size_type lsst::afw::table::CatalogT< RecordT >::size ( ) const
inlineinherited

Return the number of elements in the catalog.

Definition at line 413 of file Catalog.h.

413 { return _internal.size(); }

◆ sort() [1/4]

template<typename RecordT >
void lsst::afw::table::SortedCatalogT< RecordT >::sort ( )
inlineinherited

Sort the vector in-place by ID.

Definition at line 66 of file SortedCatalog.h.

66 { this->sort(Table::getIdKey()); }
void sort()
Sort the vector in-place by ID.
Definition: SortedCatalog.h:66

◆ sort() [2/4]

template<typename RecordT >
template<typename Compare >
void lsst::afw::table::CatalogT< RecordT >::sort ( typename Compare  )
inherited

Sort the catalog in-place by the field with the given predicate.

cmp(a, b) should return true if record a is less than record b, and false otherwise.

Definition at line 603 of file Catalog.h.

742  {
743  detail::ComparisonAdaptor<RecordT, Compare> f = {cmp};
744  std::stable_sort(_internal.begin(), _internal.end(), f);
745 }
T stable_sort(T... args)

◆ sort() [3/4]

template<typename RecordT >
template<typename T >
void lsst::afw::table::CatalogT< RecordT >::sort ( Key< T > const &  key)
inherited

Sort the catalog in-place by the field with the given key.

Definition at line 756 of file Catalog.h.

756  {
757  detail::KeyComparisonFunctor<RecordT, T> f = {key};
758  return sort(f);
759 }
void sort(Key< T > const &key)
Sort the catalog in-place by the field with the given key.
Definition: Catalog.h:756

◆ sort() [4/4]

template<typename RecordT >
template<typename T >
void lsst::afw::table::CatalogT< RecordT >::sort ( typename T  )
inherited

Sort the catalog in-place by the field with the given key.

Definition at line 595 of file Catalog.h.

756  {
757  detail::KeyComparisonFunctor<RecordT, T> f = {key};
758  return sort(f);
759 }

◆ subset() [1/2]

template<typename RecordT >
ExposureCatalogT<RecordT> lsst::afw::table::ExposureCatalogT< RecordT >::subset ( ndarray::Array< bool const, 1 > const &  mask) const
inline

Return the subset of a catalog corresponding to the True values of the given mask array.

The returned array's records are shallow copies, and hence will not in general be contiguous.

Definition at line 450 of file Exposure.h.

450  {
452  }
afw::table::Key< afw::table::Array< MaskPixelT > > mask
ExposureCatalogT(std::shared_ptr< Table > const &table=std::shared_ptr< Table >())
Construct a vector from a table (or nothing).
Definition: Exposure.h:327
SortedCatalogT< RecordT > subset(ndarray::Array< bool const, 1 > const &mask) const
Return the subset of a catalog corresponding to the True values of the given mask array.

◆ subset() [2/2]

template<typename RecordT >
ExposureCatalogT lsst::afw::table::ExposureCatalogT< RecordT >::subset ( std::ptrdiff_t  startd,
std::ptrdiff_t  stopd,
std::ptrdiff_t  step 
) const
inline

Shallow copy a subset of another ExposureCatalog.

Mostly here for use from python.

Definition at line 458 of file Exposure.h.

458  {
459  return ExposureCatalogT(Base::subset(startd, stopd, step));
460  }
int const step

◆ subsetContaining() [1/2]

template<typename RecordT >
ExposureCatalogT< RecordT > lsst::afw::table::ExposureCatalogT< RecordT >::subsetContaining ( lsst::geom::Point2D const &  point,
geom::SkyWcs const &  wcs,
bool  includeValidPolygon = false 
) const

Return a shallow subset of the catalog with only those records that contain the given point.

If includeValidPolygon is true we check that the point is within the validPolygon of those records which have one; if they don't, this argument is ignored.

See also
ExposureRecord::contains

Definition at line 483 of file Exposure.cc.

485  {
487  for (const_iterator i = this->begin(); i != this->end(); ++i) {
488  if (i->contains(point, wcs, includeValidPolygon)) {
489  result.push_back(i);
490  }
491  }
492  return result;
493 }
typename Base::const_iterator const_iterator
Definition: Exposure.h:319
Key< int > wcs
Definition: Exposure.cc:64

◆ subsetContaining() [2/2]

template<typename RecordT >
ExposureCatalogT< RecordT > lsst::afw::table::ExposureCatalogT< RecordT >::subsetContaining ( lsst::geom::SpherePoint const &  coord,
bool  includeValidPolygon = false 
) const

Return a shallow subset of the catalog with only those records that contain the given point.

If includeValidPolygon is true we check that the point is within the validPolygon of those records which have one; if they don't, this argument is ignored.

See also
ExposureRecord::contains

Definition at line 471 of file Exposure.cc.

472  {
474  for (const_iterator i = this->begin(); i != this->end(); ++i) {
475  if (i->contains(coord, includeValidPolygon)) {
476  result.push_back(i);
477  }
478  }
479  return result;
480 }

◆ swap()

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::swap ( CatalogT< RecordT > &  other)
inlinenoexceptinherited

Shallow swap of two catalogs.

Definition at line 573 of file Catalog.h.

573  {
574  _table.swap(other._table);
575  _internal.swap(other._internal);
576  }
T swap(T... args)

◆ upper_bound() [1/2]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::iterator lsst::afw::table::CatalogT< RecordT >::upper_bound ( typename Field< T >::Value const &  value,
Key< T > const &  key 
)
inherited

Definition at line 827 of file Catalog.h.

828  {
829  detail::KeyExtractionFunctor<RecordT, T> f = {key};
830  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
831  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, iterator>;
832  SearchIter i = std::upper_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
833  return i.base();
834 }
T upper_bound(T... args)

◆ upper_bound() [2/2]

template<typename RecordT >
template<typename T >
CatalogT< RecordT >::const_iterator lsst::afw::table::CatalogT< RecordT >::upper_bound ( typename Field< T >::Value const &  value,
Key< T > const &  key 
) const
inherited

Definition at line 838 of file Catalog.h.

839  {
840  detail::KeyExtractionFunctor<RecordT, T> f = {key};
841  // Iterator adaptor that makes a CatalogT iterator work like an iterator over field values.
842  using SearchIter = boost::transform_iterator<detail::KeyExtractionFunctor<RecordT, T>, const_iterator>;
843  SearchIter i = std::upper_bound(SearchIter(begin(), f), SearchIter(end(), f), value);
844  return i.base();
845 }

◆ writeFits() [1/4]

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::writeFits ( fits::Fits fitsfile,
int  flags = 0 
) const
inlineinherited

Write a FITS binary table to an open file object.

Parameters
[in,out]fitsfileFits file object to write to.
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalogs. See e.g. SourceFitsFlags.

Definition at line 334 of file Catalog.h.

334  {
335  io::FitsWriter::apply(fitsfile, *this, flags);
336  }
static void apply(OutputT &output, std::string const &mode, ContainerT const &container, int flags)
Driver for writing FITS files.
Definition: FitsWriter.h:37

◆ writeFits() [2/4]

template<typename RecordT >
void lsst::afw::table::ExposureCatalogT< RecordT >::writeFits ( fits::Fits fitsfile,
std::shared_ptr< io::OutputArchive archive,
int  flags = 0 
) const
inline

Write a FITS binary table to an open file object.

Instead of writing nested Persistables to an internal archive and appending it to the FITS file, this overload inserts nested Persistables into the given archive and does not save it, leaving it to the user to save it later.

Definition at line 371 of file Exposure.h.

371  {
372  std::shared_ptr<io::FitsWriter> writer = this->getTable()->makeFitsWriter(&fitsfile, archive, flags);
373  writer->write(*this);
374  }

◆ writeFits() [3/4]

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::writeFits ( fits::MemFileManager manager,
std::string const &  mode = "w",
int  flags = 0 
) const
inlineinherited

Write a FITS binary table to a RAM file.

Parameters
[in,out]managerObject that manages the memory to write to.
[in]mode"a" to append a new HDU, "w" to overwrite any existing file.
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalogs. See e.g. SourceFitsFlags.

Definition at line 323 of file Catalog.h.

323  {
324  io::FitsWriter::apply(manager, mode, *this, flags);
325  }

◆ writeFits() [4/4]

template<typename RecordT >
void lsst::afw::table::CatalogT< RecordT >::writeFits ( std::string const &  filename,
std::string const &  mode = "w",
int  flags = 0 
) const
inlineinherited

Write a FITS binary table to a regular file.

Parameters
[in]filenameName of the file to write.
[in]mode"a" to append a new HDU, "w" to overwrite any existing file.
[in]flagsTable-subclass-dependent bitflags that control the details of how to read the catalogs. See e.g. SourceFitsFlags.

Definition at line 311 of file Catalog.h.

311  {
312  io::FitsWriter::apply(filename, mode, *this, flags);
313  }

◆ writeToArchive()

template<typename RecordT >
void lsst::afw::table::ExposureCatalogT< RecordT >::writeToArchive ( io::OutputArchiveHandle handle,
bool  ignoreUnpersistable = true 
) const

Convenience output function for Persistables that contain an ExposureCatalog.

Unlike writeFits, this saves main catalog to one of the tables within the archive, as part of a Persistable's set of catalogs, rather than saving it to a separate HDU not managed by the archive.

Definition at line 444 of file Exposure.cc.

444  {
445  PersistenceHelper helper{};
446  SchemaMapper mapper = helper.makeWriteMapper(this->getSchema());
447  BaseCatalog outputCat = handle.makeCatalog(mapper.getOutputSchema());
448  outputCat.reserve(this->size());
449  for (const_iterator i = this->begin(); i != this->end(); ++i) {
450  helper.writeRecord(*i, *outputCat.addNew(), mapper, handle, permissive);
451  }
452  handle.saveCatalog(outputCat);
453 }
void reserve(size_type n)
Increase the capacity of the catalog to the given size.
Definition: Catalog.h:433
Schema getSchema() const
Return the schema associated with the catalog's table.
Definition: Catalog.h:118
CatalogT< BaseRecord > BaseCatalog
Definition: fwd.h:72

The documentation for this class was generated from the following files: