LSST Applications
21.0.0-172-gfb10e10a+18fedfabac,22.0.0+297cba6710,22.0.0+80564b0ff1,22.0.0+8d77f4f51a,22.0.0+a28f4c53b1,22.0.0+dcf3732eb2,22.0.1-1-g7d6de66+2a20fdde0d,22.0.1-1-g8e32f31+297cba6710,22.0.1-1-geca5380+7fa3b7d9b6,22.0.1-12-g44dc1dc+2a20fdde0d,22.0.1-15-g6a90155+515f58c32b,22.0.1-16-g9282f48+790f5f2caa,22.0.1-2-g92698f7+dcf3732eb2,22.0.1-2-ga9b0f51+7fa3b7d9b6,22.0.1-2-gd1925c9+bf4f0e694f,22.0.1-24-g1ad7a390+a9625a72a8,22.0.1-25-g5bf6245+3ad8ecd50b,22.0.1-25-gb120d7b+8b5510f75f,22.0.1-27-g97737f7+2a20fdde0d,22.0.1-32-gf62ce7b1+aa4237961e,22.0.1-4-g0b3f228+2a20fdde0d,22.0.1-4-g243d05b+871c1b8305,22.0.1-4-g3a563be+32dcf1063f,22.0.1-4-g44f2e3d+9e4ab0f4fa,22.0.1-42-gca6935d93+ba5e5ca3eb,22.0.1-5-g15c806e+85460ae5f3,22.0.1-5-g58711c4+611d128589,22.0.1-5-g75bb458+99c117b92f,22.0.1-6-g1c63a23+7fa3b7d9b6,22.0.1-6-g50866e6+84ff5a128b,22.0.1-6-g8d3140d+720564cf76,22.0.1-6-gd805d02+cc5644f571,22.0.1-8-ge5750ce+85460ae5f3,master-g6e05de7fdc+babf819c66,master-g99da0e417a+8d77f4f51a,w.2021.48
LSST Data Management Base Package
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Public Member Functions | |
def | __iter__ (self) |
def | keys (self) |
def | values (self) |
def | items (self) |
def | iteritems (self) |
def | itervalues (self) |
def | iterkeys (self) |
def | __contains__ (self, name) |
Return True if the specified field exists in this config. More... | |
def | __new__ (cls, *args, **kw) |
def | __reduce__ (self) |
def | setDefaults (self) |
def | update (self, **kw) |
def | load (self, filename, root="config") |
def | loadFromStream (self, stream, root="config", filename=None) |
def | save (self, filename, root="config") |
def | saveToStream (self, outfile, root="config", skipImports=False) |
def | freeze (self) |
def | toDict (self) |
def | names (self) |
def | validate (self) |
def | formatHistory (self, name, **kwargs) |
def | __setattr__ (self, attr, value, at=None, label="assignment") |
def | __setattr__ (cls, name, value) |
def | __delattr__ (self, attr, at=None, label="deletion") |
def | __eq__ (self, other) |
def | __ne__ (self, other) |
def | __str__ (self) |
def | __repr__ (self) |
def | compare (self, other, shortcut=True, rtol=1E-8, atol=1E-8, output=None) |
def | __init_subclass__ (cls, **kwargs) |
Static Public Attributes | |
doMeasure | |
bool | doMeasureN = False |
Properties | |
history = property(lambda x: x._history) | |
Configuration for the variance calculation plugin.
Definition at line 459 of file plugins.py.
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Return True if the specified field exists in this config.
@param[in] name field name to test for
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Run initialization for every subclass. Specifically registers the subclass with a YAML representer and YAML constructor (if pyyaml is available)
Reimplemented in lsst.pipe.tasks.dataFrameActions._baseDataFrameActions.DataFrameAction.
Definition at line 1447 of file config.py.
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Allocate a new `lsst.pex.config.Config` object. In order to ensure that all Config object are always in a proper state when handed to users or to derived `~lsst.pex.config.Config` classes, some attributes are handled at allocation time rather than at initialization. This ensures that even if a derived `~lsst.pex.config.Config` class implements ``__init__``, its author does not need to be concerned about when or even the base ``Config.__init__`` should be called.
Definition at line 893 of file config.py.
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Reduction for pickling (function with arguments to reproduce). We need to condense and reconstitute the `~lsst.pex.config.Config`, since it may contain lambdas (as the ``check`` elements) that cannot be pickled.
Definition at line 926 of file config.py.
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Set an attribute (such as a field's value). Notes ----- Unlike normal Python objects, `~lsst.pex.config.Config` objects are locked such that no additional attributes nor properties may be added to them dynamically. Although this is not the standard Python behavior, it helps to protect users from accidentally mispelling a field name, or trying to set a non-existent field.
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Compare this configuration to another `~lsst.pex.config.Config` for equality. Parameters ---------- other : `lsst.pex.config.Config` Other `~lsst.pex.config.Config` object to compare against this config. shortcut : `bool`, optional If `True`, return as soon as an inequality is found. Default is `True`. rtol : `float`, optional Relative tolerance for floating point comparisons. atol : `float`, optional Absolute tolerance for floating point comparisons. output : callable, optional A callable that takes a string, used (possibly repeatedly) to report inequalities. Returns ------- isEqual : `bool` `True` when the two `lsst.pex.config.Config` instances are equal. `False` if there is an inequality. See also -------- lsst.pex.config.compareConfigs Notes ----- Unselected targets of `~lsst.pex.config.RegistryField` fields and unselected choices of `~lsst.pex.config.ConfigChoiceField` fields are not considered by this method. Floating point comparisons are performed by `numpy.allclose`.
Definition at line 1402 of file config.py.
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Format a configuration field's history to a human-readable format. Parameters ---------- name : `str` Name of a `~lsst.pex.config.Field` in this config. kwargs Keyword arguments passed to `lsst.pex.config.history.format`. Returns ------- history : `str` A string containing the formatted history. See also -------- lsst.pex.config.history.format
Definition at line 1311 of file config.py.
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Get field names. Returns ------- names : `list` List of `lsst.pex.config.Field` names. See also -------- lsst.pex.config.Config.iterkeys
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Modify this config in place by executing the Python code in a configuration file. Parameters ---------- filename : `str` Name of the configuration file. A configuration file is Python module. root : `str`, optional Name of the variable in file that refers to the config being overridden. For example, the value of root is ``"config"`` and the file contains:: config.myField = 5 Then this config's field ``myField`` is set to ``5``. **Deprecated:** For backwards compatibility, older config files that use ``root="root"`` instead of ``root="config"`` will be loaded with a warning printed to `sys.stderr`. This feature will be removed at some point. See also -------- lsst.pex.config.Config.loadFromStream lsst.pex.config.Config.save lsst.pex.config.Config.saveFromStream
Definition at line 1012 of file config.py.
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Modify this Config in place by executing the Python code in the provided stream. Parameters ---------- stream : file-like object, `str`, or compiled string Stream containing configuration override code. root : `str`, optional Name of the variable in file that refers to the config being overridden. For example, the value of root is ``"config"`` and the file contains:: config.myField = 5 Then this config's field ``myField`` is set to ``5``. **Deprecated:** For backwards compatibility, older config files that use ``root="root"`` instead of ``root="config"`` will be loaded with a warning printed to `sys.stderr`. This feature will be removed at some point. filename : `str`, optional Name of the configuration file, or `None` if unknown or contained in the stream. Used for error reporting. See also -------- lsst.pex.config.Config.load lsst.pex.config.Config.save lsst.pex.config.Config.saveFromStream
Definition at line 1047 of file config.py.
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Save a Python script to the named file, which, when loaded, reproduces this config. Parameters ---------- filename : `str` Desination filename of this configuration. root : `str`, optional Name to use for the root config variable. The same value must be used when loading (see `lsst.pex.config.Config.load`). See also -------- lsst.pex.config.Config.saveToStream lsst.pex.config.Config.load lsst.pex.config.Config.loadFromStream
Definition at line 1103 of file config.py.
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Save a configuration file to a stream, which, when loaded, reproduces this config. Parameters ---------- outfile : file-like object Destination file object write the config into. Accepts strings not bytes. root Name to use for the root config variable. The same value must be used when loading (see `lsst.pex.config.Config.load`). skipImports : `bool`, optional If `True` then do not include ``import`` statements in output, this is to support human-oriented output from ``pipetask`` where additional clutter is not useful. See also -------- lsst.pex.config.Config.save lsst.pex.config.Config.load lsst.pex.config.Config.loadFromStream
Definition at line 1135 of file config.py.
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Subclass hook for computing defaults. Notes ----- Derived `~lsst.pex.config.Config` classes that must compute defaults rather than using the `~lsst.pex.config.Field` instances's defaults should do so here. To correctly use inherited defaults, implementations of ``setDefaults`` must call their base class's ``setDefaults``.
Reimplemented in lsst.pipe.tasks.scaleVariance.ScaleVarianceConfig, lsst.pipe.tasks.mocks.mockCoadd.MockCoaddConfig, lsst.pipe.tasks.ingestCuratedCalibs.IngestCuratedCalibsConfig, lsst.pipe.tasks.dataFrameActions._actions.NanoJansky, lsst.pipe.drivers.multiBandDriver.MultiBandDriverConfig, lsst.pipe.drivers.constructCalibs.FringeConfig, lsst.pipe.drivers.constructCalibs.DarkConfig, lsst.pipe.drivers.constructCalibs.CalibConfig, lsst.pipe.drivers.coaddDriver.CoaddDriverConfig, lsst.pipe.drivers.background.MaskObjectsConfig, lsst.meas.modelfit.psf.psfContinued.GeneralShapeletPsfApproxForcedConfig, lsst.meas.modelfit.psf.psfContinued.GeneralShapeletPsfApproxSingleFrameConfig, lsst.meas.modelfit.cmodel.cmodelContinued.CModelForcedConfig, lsst.meas.modelfit.cmodel.cmodelContinued.CModelSingleFrameConfig, lsst.meas.base.forcedMeasurement.ForcedMeasurementConfig, and lsst.ip.diffim.dipoleMeasurement.DipoleMeasurementConfig.
Definition at line 939 of file config.py.
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Make a dictionary of field names and their values. Returns ------- dict_ : `dict` Dictionary with keys that are `~lsst.pex.config.Field` names. Values are `~lsst.pex.config.Field` values. See also -------- lsst.pex.config.Field.toDict Notes ----- This method uses the `~lsst.pex.config.Field.toDict` method of individual fields. Subclasses of `~lsst.pex.config.Field` may need to implement a ``toDict`` method for *this* method to work.
Definition at line 1208 of file config.py.
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Update values of fields specified by the keyword arguments. Parameters ---------- kw Keywords are configuration field names. Values are configuration field values. Notes ----- The ``__at`` and ``__label`` keyword arguments are special internal keywords. They are used to strip out any internal steps from the history tracebacks of the config. Do not modify these keywords to subvert a `~lsst.pex.config.Config` instance's history. Examples -------- This is a config with three fields: >>> from lsst.pex.config import Config, Field >>> class DemoConfig(Config): ... fieldA = Field(doc='Field A', dtype=int, default=42) ... fieldB = Field(doc='Field B', dtype=bool, default=True) ... fieldC = Field(doc='Field C', dtype=str, default='Hello world') ... >>> config = DemoConfig() These are the default values of each field: >>> for name, value in config.iteritems(): ... print(f"{name}: {value}") ... fieldA: 42 fieldB: True fieldC: 'Hello world' Using this method to update ``fieldA`` and ``fieldC``: >>> config.update(fieldA=13, fieldC='Updated!') Now the values of each field are: >>> for name, value in config.iteritems(): ... print(f"{name}: {value}") ... fieldA: 13 fieldB: True fieldC: 'Updated!'
Definition at line 952 of file config.py.
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Validate the Config, raising an exception if invalid. Raises ------ lsst.pex.config.FieldValidationError Raised if verification fails. Notes ----- The base class implementation performs type checks on all fields by calling their `~lsst.pex.config.Field.validate` methods. Complex single-field validation can be defined by deriving new Field types. For convenience, some derived `lsst.pex.config.Field`-types (`~lsst.pex.config.ConfigField` and `~lsst.pex.config.ConfigChoiceField`) are defined in `lsst.pex.config` that handle recursing into subconfigs. Inter-field relationships should only be checked in derived `~lsst.pex.config.Config` classes after calling this method, and base validation is complete.
Reimplemented in lsst.pipe.drivers.multiBandDriver.MultiBandDriverConfig, lsst.pipe.drivers.coaddDriver.CoaddDriverConfig, lsst.pipe.drivers.background.MaskObjectsConfig, lsst.meas.base.baseMeasurement.BaseMeasurementConfig, lsst.meas.algorithms.measureApCorr.MeasureApCorrConfig, lsst.meas.algorithms.gaussianPsfFactory.GaussianPsfFactory, lsst.fgcmcal.sedterms.Sedterm, lsst.dax.apdb.apdbSql.ApdbSqlConfig, and lsst.afw.geom.transformConfig.RadialTransformConfig.
Definition at line 1285 of file config.py.
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Definition at line 55 of file baseMeasurement.py.
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Definition at line 58 of file baseMeasurement.py.
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