LSSTApplications  17.0+124,17.0+14,17.0+73,18.0.0+37,18.0.0+80,18.0.0-4-g68ffd23+4,18.1.0-1-g0001055+12,18.1.0-1-g03d53ef+5,18.1.0-1-g1349e88+55,18.1.0-1-g2505f39+44,18.1.0-1-g5315e5e+4,18.1.0-1-g5e4b7ea+14,18.1.0-1-g7e8fceb+4,18.1.0-1-g85f8cd4+48,18.1.0-1-g8ff0b9f+4,18.1.0-1-ga2c679d+1,18.1.0-1-gd55f500+35,18.1.0-10-gb58edde+2,18.1.0-11-g0997b02+4,18.1.0-13-gfe4edf0b+12,18.1.0-14-g259bd21+21,18.1.0-19-gdb69f3f+2,18.1.0-2-g5f9922c+24,18.1.0-2-gd3b74e5+11,18.1.0-2-gfbf3545+32,18.1.0-26-g728bddb4+5,18.1.0-27-g6ff7ca9+2,18.1.0-3-g52aa583+25,18.1.0-3-g8ea57af+9,18.1.0-3-gb69f684+42,18.1.0-3-gfcaddf3+6,18.1.0-32-gd8786685a,18.1.0-4-gf3f9b77+6,18.1.0-5-g1dd662b+2,18.1.0-5-g6dbcb01+41,18.1.0-6-gae77429+3,18.1.0-7-g9d75d83+9,18.1.0-7-gae09a6d+30,18.1.0-9-gc381ef5+4,w.2019.45
LSSTDataManagementBasePackage
BaseTable.h
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1 // -*- lsst-c++ -*-
2 #ifndef AFW_TABLE_BaseTable_h_INCLUDED
3 #define AFW_TABLE_BaseTable_h_INCLUDED
4 #include <memory>
5 
6 #include "lsst/base.h"
7 #include "ndarray/Manager.h"
8 #include "lsst/afw/table/fwd.h"
10 
11 namespace lsst {
12 namespace afw {
13 
14 namespace fits {
15 
16 class Fits;
17 
18 } // namespace fits
19 
20 namespace table {
21 
22 namespace detail {
23 
32 struct RecordData {
33  void * data;
35  ndarray::Manager::Ptr manager;
36 };
37 
38 } // namespace detail
39 
61 class BaseTable : public std::enable_shared_from_this<BaseTable> {
62 public:
64  typedef BaseRecord Record;
65 
68 
71 
74 
76  static int nRecordsPerBlock;
77 
80 
82  void setMetadata(std::shared_ptr<daf::base::PropertyList> const& metadata) { _metadata = metadata; }
83 
87  _metadata.swap(tmp);
88  return tmp;
89  }
90 
100  std::shared_ptr<BaseTable> clone() const { return _clone(); }
101 
108  std::shared_ptr<BaseRecord> makeRecord() { return _makeRecord(); }
109 
127  std::shared_ptr<BaseRecord> copyRecord(BaseRecord const& input);
128 
134  std::shared_ptr<BaseRecord> copyRecord(BaseRecord const& input, SchemaMapper const& mapper);
135 
137  Schema getSchema() const { return _schema; }
138 
151  void preallocate(std::size_t nRecords);
152 
158  std::size_t getBufferSize() const;
159 
172  static std::shared_ptr<BaseTable> make(Schema const& schema);
173 
174  // Tables are not assignable to prevent type slicing.
175  BaseTable& operator=(BaseTable const& other) = delete;
176  BaseTable& operator=(BaseTable&& other) = delete;
177 
178  virtual ~BaseTable();
179 
180 protected:
181 
196  // n.b. this is implemented in BaseRecord.h, as it requires the BaseRecord
197  // definition, and must go in a header.
198  template <typename RecordT, typename ...Args>
199  std::shared_ptr<RecordT> constructRecord(Args && ...args);
200 
201  virtual void handleAliasChange(std::string const& alias) {}
202 
204  virtual std::shared_ptr<BaseTable> _clone() const;
205 
207  virtual std::shared_ptr<BaseRecord> _makeRecord();
208 
210  explicit BaseTable(Schema const& schema);
211 
213  BaseTable(BaseTable const& other) : _schema(other._schema), _metadata(other._metadata) {
214  if (_metadata) _metadata = std::static_pointer_cast<daf::base::PropertyList>(_metadata->deepCopy());
215  }
216  // Delegate to copy-constructor for backwards compatibility
217  BaseTable(BaseTable&& other) : BaseTable(other) {}
218 
219 private:
220  friend class BaseRecord;
221  friend class io::FitsWriter;
222  friend class AliasMap;
223 
224  // Obtain raw data pointers and their managing objects for a new record.
225  detail::RecordData _makeNewRecordData();
226 
227  /*
228  * Called by BaseRecord dtor to notify the table when it is about to be destroyed.
229  *
230  * This could allow the table to reclaim that space, but that requires more bookkeeping than
231  * it's presently worth unless this was the most recently allocated record.
232  *
233  * The motivation for attempting to reclaim even some memory is not because we're paranoid
234  * about using every last bit of allocated memory efficiently - it's so we can keep
235  * records contiguous as much as possible to allow ColumnView to be used.
236  */
237  void _destroy(BaseRecord& record);
238 
239  // Return a writer object that knows how to save in FITS format. See also FitsWriter.
240  virtual std::shared_ptr<io::FitsWriter> makeFitsWriter(fits::Fits* fitsfile, int flags) const;
241 
242  // All these are definitely private, not protected - we don't want derived classes mucking with them.
243  Schema _schema; // schema that defines the table's fields
244  ndarray::Manager::Ptr _manager; // current memory block to use for new records
245  std::shared_ptr<daf::base::PropertyList> _metadata; // flexible metadata; may be null
246 };
247 
248 } // namespace table
249 } // namespace afw
250 } // namespace lsst
251 
252 #endif // !AFW_TABLE_BaseTable_h_INCLUDED
Defines the fields and offsets for a table.
Definition: Schema.h:50
BaseRecord Record
The associated record class.
Definition: BaseTable.h:64
std::shared_ptr< daf::base::PropertyList > getMetadata() const
Return the flexible metadata associated with the table. May be null.
Definition: BaseTable.h:79
Column-wise view into a sequence of records that have been allocated contiguously.
Writer object for FITS binary tables.
Definition: FitsWriter.h:25
std::shared_ptr< BaseTable > clone() const
Return a polymorphic deep copy of the table.
Definition: BaseTable.h:100
std::shared_ptr< BaseRecord > makeRecord()
Default-construct an associated record.
Definition: BaseTable.h:108
Helper struct that contains the information passed from BaseTable to BaseRecord at construction...
Definition: BaseTable.h:32
BaseTable(BaseTable &&other)
Definition: BaseTable.h:217
T swap(T... args)
A custom container class for records, based on std::vector.
Definition: Catalog.h:97
Class for storing ordered metadata with comments.
Definition: PropertyList.h:68
A mapping between the keys of two Schemas, used to copy data between them.
Definition: SchemaMapper.h:21
BaseColumnView ColumnView
The associated ColumnView class.
Definition: BaseTable.h:67
Schema getSchema() const
Return the table&#39;s schema.
Definition: BaseTable.h:137
Mapping class that holds aliases for a Schema.
Definition: AliasMap.h:36
BaseTable(BaseTable const &other)
Copy construct.
Definition: BaseTable.h:213
ItemVariant const * other
Definition: Schema.cc:56
SchemaMapper * mapper
Definition: SchemaMapper.cc:78
A simple struct that combines the two arguments that must be passed to most cfitsio routines and cont...
Definition: fits.h:297
Fits * fits
Definition: FitsWriter.cc:90
STL class.
void setMetadata(std::shared_ptr< daf::base::PropertyList > const &metadata)
Set the flexible metadata associated with the table. May be null.
Definition: BaseTable.h:82
static int nRecordsPerBlock
Number of records in each memory block.
Definition: BaseTable.h:76
A base class for image defects.
CatalogT< Record const > ConstCatalog
Template of CatalogT used to hold const records of the associated type.
Definition: BaseTable.h:73
CatalogT< Record > Catalog
Template of CatalogT used to hold records of the associated type.
Definition: BaseTable.h:70
ndarray::Manager::Ptr manager
Definition: BaseTable.h:35
table::Schema schema
Definition: Amplifier.cc:115
T static_pointer_cast(T... args)
std::shared_ptr< BaseTable > table
Definition: BaseTable.h:34
Base class for all records.
Definition: BaseRecord.h:31
Basic LSST definitions.
std::shared_ptr< daf::base::PropertyList > popMetadata()
Return the metadata and set the internal metadata to a null pointer.
Definition: BaseTable.h:85
Base class for all tables.
Definition: BaseTable.h:61
virtual void handleAliasChange(std::string const &alias)
Definition: BaseTable.h:201