LSSTApplications  17.0+124,17.0+14,17.0+73,18.0.0+37,18.0.0+80,18.0.0-4-g68ffd23+4,18.1.0-1-g0001055+12,18.1.0-1-g03d53ef+5,18.1.0-1-g1349e88+55,18.1.0-1-g2505f39+44,18.1.0-1-g5315e5e+4,18.1.0-1-g5e4b7ea+14,18.1.0-1-g7e8fceb+4,18.1.0-1-g85f8cd4+48,18.1.0-1-g8ff0b9f+4,18.1.0-1-ga2c679d+1,18.1.0-1-gd55f500+35,18.1.0-10-gb58edde+2,18.1.0-11-g0997b02+4,18.1.0-13-gfe4edf0b+12,18.1.0-14-g259bd21+21,18.1.0-19-gdb69f3f+2,18.1.0-2-g5f9922c+24,18.1.0-2-gd3b74e5+11,18.1.0-2-gfbf3545+32,18.1.0-26-g728bddb4+5,18.1.0-27-g6ff7ca9+2,18.1.0-3-g52aa583+25,18.1.0-3-g8ea57af+9,18.1.0-3-gb69f684+42,18.1.0-3-gfcaddf3+6,18.1.0-32-gd8786685a,18.1.0-4-gf3f9b77+6,18.1.0-5-g1dd662b+2,18.1.0-5-g6dbcb01+41,18.1.0-6-gae77429+3,18.1.0-7-g9d75d83+9,18.1.0-7-gae09a6d+30,18.1.0-9-gc381ef5+4,w.2019.45
LSSTDataManagementBasePackage
policy.py
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1 #!/usr/bin/env python
2 
3 #
4 # LSST Data Management System
5 # Copyright 2015 LSST Corporation.
6 #
7 # This product includes software developed by the
8 # LSST Project (http://www.lsst.org/).
9 #
10 # This program is free software: you can redistribute it and/or modify
11 # it under the terms of the GNU General Public License as published by
12 # the Free Software Foundation, either version 3 of the License, or
13 # (at your option) any later version.
14 #
15 # This program is distributed in the hope that it will be useful,
16 # but WITHOUT ANY WARRANTY; without even the implied warranty of
17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
18 # GNU General Public License for more details.
19 #
20 # You should have received a copy of the LSST License Statement and
21 # the GNU General Public License along with this program. If not,
22 # see <http://www.lsstcorp.org/LegalNotices/>.
23 #
24 from builtins import str
25 from past.builtins import basestring
26 from future.utils import with_metaclass
27 
28 import collections
29 import collections.abc
30 import copy
31 import os
32 import sys
33 import warnings
34 import yaml
35 
36 import lsst.pex.policy as pexPolicy
37 import lsst.utils
38 
39 from yaml.representer import Representer
40 yaml.add_representer(collections.defaultdict, Representer.represent_dict)
41 
42 # UserDict and yaml have defined metaclasses and Python 3 does not allow multiple
43 # inheritance of classes with distinct metaclasses. We therefore have to
44 # create a new baseclass that Policy can inherit from. This is because the metaclass
45 # syntax differs between versions
46 
47 if sys.version_info[0] >= 3:
48  class _PolicyMeta(type(collections.UserDict), type(yaml.YAMLObject)):
49  pass
50 
51  class _PolicyBase(with_metaclass(_PolicyMeta, collections.UserDict, yaml.YAMLObject)):
52  pass
53 else:
54  class _PolicyBase(collections.UserDict, yaml.YAMLObject):
55  pass
56 
57 
59  """Policy implements a datatype that is used by Butler for configuration parameters.
60  It is essentially a dict with key/value pairs, including nested dicts (as values). In fact, it can be
61  initialized with a dict. The only caveat is that keys may NOT contain dots ('.'). This is explained next:
62  Policy extends the dict api so that hierarchical values may be accessed with dot-delimited notiation.
63  That is, foo.getValue('a.b.c') is the same as foo['a']['b']['c'] is the same as foo['a.b.c'], and either
64  of these syntaxes may be used.
65 
66  Storage formats supported:
67  - yaml: read and write is supported.
68  - pex policy: read is supported, although this is deprecated and will at some point be removed.
69  """
70 
71  def __init__(self, other=None):
72  """Initialize the Policy. Other can be used to initialize the Policy in a variety of ways:
73  other (string) Treated as a path to a policy file on disk. Must end with '.paf' or '.yaml'.
74  other (Pex Policy) Initializes this Policy with the values in the passed-in Pex Policy.
75  other (Policy) Copies the other Policy's values into this one.
76  other (dict) Copies the values from the dict into this Policy.
77  """
78  collections.UserDict.__init__(self)
79 
80  if other is None:
81  return
82 
83  if isinstance(other, collections.abc.Mapping):
84  self.update(other)
85  elif isinstance(other, Policy):
86  self.data = copy.deepcopy(other.data)
87  elif isinstance(other, basestring):
88  # if other is a string, assume it is a file path.
89  self.__initFromFile(other)
90  elif isinstance(other, pexPolicy.Policy):
91  # if other is an instance of a Pex Policy, load it accordingly.
92  self.__initFromPexPolicy(other)
93  else:
94  # if the policy specified by other could not be loaded raise a runtime error.
95  raise RuntimeError("A Policy could not be loaded from other:%s" % other)
96 
97  def ppprint(self):
98  """helper function for debugging, prints a policy out in a readable way in the debugger.
99 
100  use: pdb> print myPolicyObject.pprint()
101  :return: a prettyprint formatted string representing the policy
102  """
103  import pprint
104  return pprint.pformat(self.data, indent=2, width=1)
105 
106  def __repr__(self):
107  return self.data.__repr__()
108 
109  def __initFromFile(self, path):
110  """Load a file from path. If path is a list, will pick one to use, according to order specified
111  by extensionPreference.
112 
113  :param path: string or list of strings, to a persisted policy file.
114  :param extensionPreference: the order in which to try to open files. Will use the first one that
115  succeeds.
116  :return:
117  """
118  policy = None
119  if path.endswith('yaml'):
120  self.__initFromYamlFile(path)
121  elif path.endswith('paf'):
122  policy = pexPolicy.Policy.createPolicy(path)
123  self.__initFromPexPolicy(policy)
124  else:
125  raise RuntimeError("Unhandled policy file type:%s" % path)
126 
127  def __initFromPexPolicy(self, pexPolicy):
128  """Load values from a pex policy.
129 
130  :param pexPolicy:
131  :return:
132  """
133  names = pexPolicy.names()
134  names.sort()
135  for name in names:
136  if pexPolicy.getValueType(name) == pexPolicy.POLICY:
137  if name in self:
138  continue
139  else:
140  self[name] = {}
141  else:
142  if pexPolicy.isArray(name):
143  self[name] = pexPolicy.getArray(name)
144  else:
145  self[name] = pexPolicy.get(name)
146  return self
147 
148  def __initFromYamlFile(self, path):
149  """Opens a file at a given path and attempts to load it in from yaml.
150 
151  :param path:
152  :return:
153  """
154  with open(path, 'r') as f:
155  self.__initFromYaml(f)
156 
157  def __initFromYaml(self, stream):
158  """Loads a YAML policy from any readable stream that contains one.
159 
160  :param stream:
161  :return:
162  """
163  # will raise yaml.YAMLError if there is an error loading the file.
164  try:
165  # PyYAML >=5.1 prefers a different loader
166  loader = yaml.FullLoader
167  except AttributeError:
168  loader = yaml.Loader
169  self.data = yaml.load(stream, Loader=loader)
170  return self
171 
172  def __getitem__(self, name):
173  data = self.data
174  for key in name.split('.'):
175  if data is None:
176  return None
177  if key in data:
178  data = data[key]
179  else:
180  return None
181  if isinstance(data, collections.abc.Mapping):
182  data = Policy(data)
183  return data
184 
185  def __setitem__(self, name, value):
186  if isinstance(value, collections.abc.Mapping):
187  keys = name.split('.')
188  d = {}
189  cur = d
190  for key in keys[0:-1]:
191  cur[key] = {}
192  cur = cur[key]
193  cur[keys[-1]] = value
194  self.update(d)
195  data = self.data
196  keys = name.split('.')
197  for key in keys[0:-1]:
198  data = data.setdefault(key, {})
199  data[keys[-1]] = value
200 
201  def __contains__(self, key):
202  d = self.data
203  keys = key.split('.')
204  for k in keys[0:-1]:
205  if k in d:
206  d = d[k]
207  else:
208  return False
209  return keys[-1] in d
210 
211  @staticmethod
212  def defaultPolicyFile(productName, fileName, relativePath=None):
213  """Get the path to a default policy file.
214 
215  Determines a directory for the product specified by productName. Then Concatenates
216  productDir/relativePath/fileName (or productDir/fileName if relativePath is None) to find the path
217  to the default Policy file
218 
219  @param productName (string) The name of the product that the default policy is installed as part of
220  @param fileName (string) The name of the policy file. Can also include a path to the file relative to
221  the directory where the product is installed.
222  @param relativePath (string) The relative path from the directior where the product is installed to
223  the location where the file (or the path to the file) is found. If None
224  (default), the fileName argument is relative to the installation
225  directory.
226  """
227  basePath = lsst.utils.getPackageDir(productName)
228  if not basePath:
229  raise RuntimeError("No product installed for productName: %s" % basePath)
230  if relativePath is not None:
231  basePath = os.path.join(basePath, relativePath)
232  fullFilePath = os.path.join(basePath, fileName)
233  return fullFilePath
234 
235  def update(self, other):
236  """Like dict.update, but will add or modify keys in nested dicts, instead of overwriting the nested
237  dict entirely.
238 
239  For example, for the given code:
240  foo = {'a': {'b': 1}}
241  foo.update({'a': {'c': 2}})
242 
243  If foo is a dict, then after the update foo == {'a': {'c': 2}}
244  But if foo is a Policy, then after the update foo == {'a': {'b': 1, 'c': 2}}
245  """
246  def doUpdate(d, u):
247  for k, v in u.items():
248  if isinstance(d, collections.abc.Mapping):
249  if isinstance(v, collections.abc.Mapping):
250  r = doUpdate(d.get(k, {}), v)
251  d[k] = r
252  else:
253  d[k] = u[k]
254  else:
255  d = {k: u[k]}
256  return d
257  doUpdate(self.data, other)
258 
259  def merge(self, other):
260  """Like Policy.update, but will add keys & values from other that DO NOT EXIST in self. Keys and
261  values that already exist in self will NOT be overwritten.
262 
263  :param other:
264  :return:
265  """
266  otherCopy = copy.deepcopy(other)
267  otherCopy.update(self)
268  self.data = otherCopy.data
269 
270  def names(self, topLevelOnly=False):
271  """Get the dot-delimited name of all the keys in the hierarchy.
272  NOTE: this is different than the built-in method dict.keys, which will return only the first level
273  keys.
274  """
275  if topLevelOnly:
276  return list(self.keys())
277 
278  def getKeys(d, keys, base):
279  for key in d:
280  val = d[key]
281  levelKey = base + '.' + key if base is not None else key
282  keys.append(levelKey)
283  if isinstance(val, collections.abc.Mapping):
284  getKeys(val, keys, levelKey)
285  keys = []
286  getKeys(self.data, keys, None)
287  return keys
288 
289  def asArray(self, name):
290  """Get a value as an array. May contain one or more elements.
291 
292  :param key:
293  :return:
294  """
295  val = self.get(name)
296  if isinstance(val, basestring):
297  val = [val]
298  elif not isinstance(val, collections.abc.Container):
299  val = [val]
300  return val
301 
302  # Deprecated methods that mimic pex_policy api.
303  # These are supported (for now), but callers should use the dict api.
304 
305  def getValue(self, name):
306  """Get the value for a parameter name/key. See class notes about dot-delimited access.
307 
308  :param name:
309  :return: the value for the given name.
310  """
311  warnings.warn_explicit("Deprecated. Use []", DeprecationWarning)
312  return self[name]
313 
314  def setValue(self, name, value):
315  """Set the value for a parameter name/key. See class notes about dot-delimited access.
316 
317  :param name:
318  :return: None
319  """
320  warnings.warn("Deprecated. Use []", DeprecationWarning)
321  self[name] = value
322 
323  def mergeDefaults(self, other):
324  """For any keys in other that are not present in self, sets that key and its value into self.
325 
326  :param other: another Policy
327  :return: None
328  """
329  warnings.warn("Deprecated. Use .merge()", DeprecationWarning)
330  self.merge(other)
331 
332  def exists(self, key):
333  """Query if a key exists in this Policy
334 
335  :param key:
336  :return: True if the key exists, else false.
337  """
338  warnings.warn("Deprecated. Use 'key in object'", DeprecationWarning)
339  return key in self
340 
341  def getString(self, key):
342  """Get the string value of a key.
343 
344  :param key:
345  :return: the value for key
346  """
347  warnings.warn("Deprecated. Use []", DeprecationWarning)
348  return str(self[key])
349 
350  def getBool(self, key):
351  """Get the value of a key.
352 
353  :param key:
354  :return: the value for key
355  """
356  warnings.warn("Deprecated. Use []", DeprecationWarning)
357  return bool(self[key])
358 
359  def getPolicy(self, key):
360  """Get a subpolicy.
361 
362  :param key:
363  :return:
364  """
365  warnings.warn("Deprecated. Use []", DeprecationWarning)
366  return self[key]
367 
368  def getStringArray(self, key):
369  """Get a value as an array. May contain one or more elements.
370 
371  :param key:
372  :return:
373  """
374  warnings.warn("Deprecated. Use asArray()", DeprecationWarning)
375  val = self.get(key)
376  if isinstance(val, basestring):
377  val = [val]
378  elif not isinstance(val, collections.abc.Container):
379  val = [val]
380  return val
381 
382  def __lt__(self, other):
383  if isinstance(other, Policy):
384  other = other.data
385  return self.data < other
386 
387  def __le__(self, other):
388  if isinstance(other, Policy):
389  other = other.data
390  return self.data <= other
391 
392  def __eq__(self, other):
393  if isinstance(other, Policy):
394  other = other.data
395  return self.data == other
396 
397  def __ne__(self, other):
398  if isinstance(other, Policy):
399  other = other.data
400  return self.data != other
401 
402  def __gt__(self, other):
403  if isinstance(other, Policy):
404  other = other.data
405  return self.data > other
406 
407  def __ge__(self, other):
408  if isinstance(other, Policy):
409  other = other.data
410  return self.data >= other
411 
412 
414 
415  def dump(self, output):
416  """Writes the policy to a yaml stream.
417 
418  :param stream:
419  :return:
420  """
421  # First a set of known keys is handled and written to the stream in a specific order for readability.
422  # After the expected/ordered keys are weritten to the stream the remainder of the keys are written to
423  # the stream.
424  data = copy.copy(self.data)
425  keys = ['defects', 'needCalibRegistry', 'levels', 'defaultLevel', 'defaultSubLevels', 'camera',
426  'exposures', 'calibrations', 'datasets']
427  for key in keys:
428  try:
429  yaml.safe_dump({key: data.pop(key)}, output, default_flow_style=False)
430  output.write('\n')
431  except KeyError:
432  pass
433  if data:
434  yaml.safe_dump(data, output, default_flow_style=False)
435 
436  def dumpToFile(self, path):
437  """Writes the policy to a file.
438 
439  :param path:
440  :return:
441  """
442  with open(path, 'w') as f:
443  self.dump(f)
def __initFromYaml(self, stream)
Definition: policy.py:157
def __initFromYamlFile(self, path)
Definition: policy.py:148
def dump(self, output)
i/o #
Definition: policy.py:415
def __initFromPexPolicy(self, pexPolicy)
Definition: policy.py:127
a container for holding hierarchical configuration data in memory.
Definition: Policy.h:167
def __setitem__(self, name, value)
Definition: policy.py:185
std::string getPackageDir(std::string const &packageName)
return the root directory of a setup package
Definition: packaging.cc:33
table::Key< int > type
Definition: Detector.cc:163
def __init__(self, other=None)
Definition: policy.py:71
def defaultPolicyFile(productName, fileName, relativePath=None)
Definition: policy.py:212
def mergeDefaults(self, other)
Definition: policy.py:323
def names(self, topLevelOnly=False)
Definition: policy.py:270
daf::base::PropertyList * list
Definition: fits.cc:903
def setValue(self, name, value)
Definition: policy.py:314