LSSTApplications  18.0.0+106,18.0.0+50,19.0.0,19.0.0+1,19.0.0+10,19.0.0+11,19.0.0+13,19.0.0+17,19.0.0+2,19.0.0-1-g20d9b18+6,19.0.0-1-g425ff20,19.0.0-1-g5549ca4,19.0.0-1-g580fafe+6,19.0.0-1-g6fe20d0+1,19.0.0-1-g7011481+9,19.0.0-1-g8c57eb9+6,19.0.0-1-gb5175dc+11,19.0.0-1-gdc0e4a7+9,19.0.0-1-ge272bc4+6,19.0.0-1-ge3aa853,19.0.0-10-g448f008b,19.0.0-12-g6990b2c,19.0.0-2-g0d9f9cd+11,19.0.0-2-g3d9e4fb2+11,19.0.0-2-g5037de4,19.0.0-2-gb96a1c4+3,19.0.0-2-gd955cfd+15,19.0.0-3-g2d13df8,19.0.0-3-g6f3c7dc,19.0.0-4-g725f80e+11,19.0.0-4-ga671dab3b+1,19.0.0-4-gad373c5+3,19.0.0-5-ga2acb9c+2,19.0.0-5-gfe96e6c+2,w.2020.01
LSSTDataManagementBasePackage
Prior.h
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1 // -*- lsst-c++ -*-
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23 
24 #ifndef LSST_MEAS_MODELFIT_Prior_h_INCLUDED
25 #define LSST_MEAS_MODELFIT_Prior_h_INCLUDED
26 
27 #include "lsst/base.h"
28 #include "lsst/afw/math/Random.h"
30 
31 namespace lsst { namespace meas { namespace modelfit {
32 
36 class Prior {
37 public:
38 
39  std::string const & getTag() const { return _tag; }
40 
47  virtual Scalar evaluate(
48  ndarray::Array<Scalar const,1,1> const & nonlinear,
49  ndarray::Array<Scalar const,1,1> const & amplitudes
50  ) const = 0;
51 
67  virtual void evaluateDerivatives(
68  ndarray::Array<Scalar const,1,1> const & nonlinear,
69  ndarray::Array<Scalar const,1,1> const & amplitudes,
70  ndarray::Array<Scalar,1,1> const & nonlinearGradient,
71  ndarray::Array<Scalar,1,1> const & amplitudeGradient,
72  ndarray::Array<Scalar,2,1> const & nonlinearHessian,
73  ndarray::Array<Scalar,2,1> const & amplitudeHessian,
74  ndarray::Array<Scalar,2,1> const & crossHessian
75  ) const = 0;
76 
110  virtual Scalar marginalize(
111  Vector const & gradient, Matrix const & hessian,
112  ndarray::Array<Scalar const,1,1> const & nonlinear
113  ) const = 0;
114 
127  virtual Scalar maximize(
128  Vector const & gradient, Matrix const & hessian,
129  ndarray::Array<Scalar const,1,1> const & nonlinear,
130  ndarray::Array<Scalar,1,1> const & amplitudes
131  ) const = 0;
132 
152  virtual void drawAmplitudes(
153  Vector const & gradient, Matrix const & hessian,
154  ndarray::Array<Scalar const,1,1> const & nonlinear,
155  afw::math::Random & rng,
156  ndarray::Array<Scalar,2,1> const & amplitudes,
157  ndarray::Array<Scalar,1,1> const & weights,
158  bool multiplyWeights=false
159  ) const = 0;
160 
161  virtual ~Prior() {}
162 
163  // No copying
164  Prior (const Prior&) = delete;
165  Prior& operator=(const Prior&) = delete;
166 
167  // No moving
168  Prior (Prior&&) = delete;
169  Prior& operator=(Prior&&) = delete;
170 
171 protected:
172 
173  explicit Prior(std::string const & tag="") : _tag(tag) {}
174 
175 private:
176  std::string _tag;
177 };
178 
179 }}} // namespace lsst::meas::modelfit
180 
181 #endif // !LSST_MEAS_MODELFIT_Prior_h_INCLUDED
virtual void evaluateDerivatives(ndarray::Array< Scalar const, 1, 1 > const &nonlinear, ndarray::Array< Scalar const, 1, 1 > const &amplitudes, ndarray::Array< Scalar, 1, 1 > const &nonlinearGradient, ndarray::Array< Scalar, 1, 1 > const &amplitudeGradient, ndarray::Array< Scalar, 2, 1 > const &nonlinearHessian, ndarray::Array< Scalar, 2, 1 > const &amplitudeHessian, ndarray::Array< Scalar, 2, 1 > const &crossHessian) const =0
Evaluate the derivatives of the prior at the given point in nonlinear and amplitude space...
Basic LSST definitions.
double Scalar
Typedefs to be used for probability and parameter values.
Definition: common.h:44
Prior & operator=(const Prior &)=delete
table::Key< table::Array< double > > amplitudes
STL class.
A base class for image defects.
std::string const & getTag() const
Definition: Prior.h:39
Eigen::Matrix< Scalar, Eigen::Dynamic, Eigen::Dynamic > Matrix
Typedefs to be used for probability and parameter values.
Definition: common.h:45
virtual void drawAmplitudes(Vector const &gradient, Matrix const &hessian, ndarray::Array< Scalar const, 1, 1 > const &nonlinear, afw::math::Random &rng, ndarray::Array< Scalar, 2, 1 > const &amplitudes, ndarray::Array< Scalar, 1, 1 > const &weights, bool multiplyWeights=false) const =0
Draw a set of Monte Carlo amplitude vectors.
Eigen::Matrix< Scalar, Eigen::Dynamic, 1 > Vector
Typedefs to be used for probability and parameter values.
Definition: common.h:46
Prior(std::string const &tag="")
Definition: Prior.h:173
Base class for Bayesian priors.
Definition: Prior.h:36
virtual Scalar maximize(Vector const &gradient, Matrix const &hessian, ndarray::Array< Scalar const, 1, 1 > const &nonlinear, ndarray::Array< Scalar, 1, 1 > const &amplitudes) const =0
Compute the amplitude vector that maximizes the prior x likelihood product.
virtual Scalar marginalize(Vector const &gradient, Matrix const &hessian, ndarray::Array< Scalar const, 1, 1 > const &nonlinear) const =0
Return the -log amplitude integral of the prior*likelihood product.
virtual Scalar evaluate(ndarray::Array< Scalar const, 1, 1 > const &nonlinear, ndarray::Array< Scalar const, 1, 1 > const &amplitudes) const =0
Evaluate the prior at the given point in nonlinear and amplitude space.
Prior(const Prior &)=delete
A class that can be used to generate sequences of random numbers according to a number of different a...
Definition: Random.h:57