LSSTApplications  19.0.0-14-gb0260a2+72efe9b372,20.0.0+7927753e06,20.0.0+8829bf0056,20.0.0+995114c5d2,20.0.0+b6f4b2abd1,20.0.0+bddc4f4cbe,20.0.0-1-g253301a+8829bf0056,20.0.0-1-g2b7511a+0d71a2d77f,20.0.0-1-g5b95a8c+7461dd0434,20.0.0-12-g321c96ea+23efe4bbff,20.0.0-16-gfab17e72e+fdf35455f6,20.0.0-2-g0070d88+ba3ffc8f0b,20.0.0-2-g4dae9ad+ee58a624b3,20.0.0-2-g61b8584+5d3db074ba,20.0.0-2-gb780d76+d529cf1a41,20.0.0-2-ged6426c+226a441f5f,20.0.0-2-gf072044+8829bf0056,20.0.0-2-gf1f7952+ee58a624b3,20.0.0-20-geae50cf+e37fec0aee,20.0.0-25-g3dcad98+544a109665,20.0.0-25-g5eafb0f+ee58a624b3,20.0.0-27-g64178ef+f1f297b00a,20.0.0-3-g4cc78c6+e0676b0dc8,20.0.0-3-g8f21e14+4fd2c12c9a,20.0.0-3-gbd60e8c+187b78b4b8,20.0.0-3-gbecbe05+48431fa087,20.0.0-38-ge4adf513+a12e1f8e37,20.0.0-4-g97dc21a+544a109665,20.0.0-4-gb4befbc+087873070b,20.0.0-4-gf910f65+5d3db074ba,20.0.0-5-gdfe0fee+199202a608,20.0.0-5-gfbfe500+d529cf1a41,20.0.0-6-g64f541c+d529cf1a41,20.0.0-6-g9a5b7a1+a1cd37312e,20.0.0-68-ga3f3dda+5fca18c6a4,20.0.0-9-g4aef684+e18322736b,w.2020.45
LSSTDataManagementBasePackage
FluxUtilities.cc
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1 // -*- lsst-c++ -*-
2 /*
3  * LSST Data Management System
4  * Copyright 2008-2015 AURA/LSST.
5  *
6  * This product includes software developed by the
7  * LSST Project (http://www.lsst.org/).
8  *
9  * This program is free software: you can redistribute it and/or modify
10  * it under the terms of the GNU General Public License as published by
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17  * GNU General Public License for more details.
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21  * see <http://www.lsstcorp.org/LegalNotices/>.
22  */
23 
27 
28 namespace lsst {
29 namespace meas {
30 namespace base {
31 
33  : instFlux(std::numeric_limits<meas::base::Flux>::quiet_NaN()),
34  instFluxErr(std::numeric_limits<meas::base::FluxErrElement>::quiet_NaN()) {}
35 
37  std::string const& doc) {
39  result._instFlux = schema.addField<meas::base::Flux>(schema.join(name, "instFlux"), doc, "count");
40  result._instFluxErr = schema.addField<meas::base::FluxErrElement>(
41  schema.join(name, "instFluxErr"), "1-sigma instFlux uncertainty", "count");
42  return result;
43 }
44 
46  FluxResult r;
47  r.instFlux = record.get(_instFlux);
48  r.instFluxErr = record.get(_instFluxErr);
49  return r;
50 }
51 
52 void FluxResultKey::set(afw::table::BaseRecord& record, FluxResult const& value) const {
53  record.set(_instFlux, value.instFlux);
54  record.set(_instFluxErr, value.instFluxErr);
55 }
56 
59  result._magKey = schema.addField<Mag>(schema.join(name, "mag"), "Magnitude");
60  result._magErrKey = schema.addField<MagErrElement>(schema.join(name, "magErr"), "Error on magnitude");
61  return result;
62 }
63 
65  MagResult result = {record.get(_magKey), record.get(_magErrKey)};
66  return result;
67 }
68 
69 void MagResultKey::set(afw::table::BaseRecord& record, MagResult const& magResult) const {
70  record.set(_magKey, magResult.mag);
71  record.set(_magErrKey, magResult.magErr);
72 }
73 
74 void MagResultKey::set(afw::table::BaseRecord& record, afw::image::Measurement const& magResult) const {
75  record.set(_magKey, magResult.value);
76  record.set(_magErrKey, magResult.error);
77 }
78 
80  : BaseTransform{name} {
81  // Map the flag through to the output
82  mapper.addMapping(mapper.getInputSchema().find<afw::table::Flag>(name + "_flag").key);
83 
84  // Add keys for the magnitude and associated error
85  _magKey = MagResultKey::addFields(mapper.editOutputSchema(), name);
86 }
87 
89  afw::table::BaseCatalog& outputCatalog, afw::geom::SkyWcs const& wcs,
90  afw::image::PhotoCalib const& photoCalib) const {
91  checkCatalogSize(inputCatalog, outputCatalog);
92  FluxResultKey instFluxKey(inputCatalog.getSchema()[_name]);
93  afw::table::SourceCatalog::const_iterator inSrc = inputCatalog.begin();
94  afw::table::BaseCatalog::iterator outSrc = outputCatalog.begin();
95  {
96  for (; inSrc != inputCatalog.end() && outSrc != outputCatalog.end(); ++inSrc, ++outSrc) {
97  FluxResult instFluxResult = instFluxKey.get(*inSrc);
98  _magKey.set(*outSrc,
99  photoCalib.instFluxToMagnitude(instFluxResult.instFlux, instFluxResult.instFluxErr));
100  }
101  }
102 }
103 
104 } // namespace base
105 } // namespace meas
106 } // namespace lsst
schema
table::Schema schema
Definition: Amplifier.cc:115
lsst::afw::table::CatalogT::end
iterator end()
Definition: Catalog.h:397
lsst::afw::image::Measurement::error
double const error
Definition: PhotoCalib.h:54
std::string
STL class.
lsst::meas::base::FluxResult::instFlux
meas::base::Flux instFlux
Measured instFlux in DN.
Definition: FluxUtilities.h:42
lsst::meas::base::MagResultKey::set
virtual void set(afw::table::BaseRecord &record, MagResult const &magResult) const
Set a MagResult in the given record.
Definition: FluxUtilities.cc:69
lsst::meas::base::FluxErrElement
double FluxErrElement
Definition: constants.h:52
lsst::meas::base::FluxResult
A reusable result struct for instFlux measurements.
Definition: FluxUtilities.h:41
lsst::meas::base::FluxResultKey::get
virtual FluxResult get(afw::table::BaseRecord const &record) const
Get a FluxResult from the given record.
Definition: FluxUtilities.cc:45
lsst::afw::table::BaseRecord::get
Field< T >::Value get(Key< T > const &key) const
Return the value of a field for the given key.
Definition: BaseRecord.h:151
lsst::meas::base::MagResultKey::get
virtual MagResult get(afw::table::BaseRecord const &record) const
Get a MagResult from the given record.
Definition: FluxUtilities.cc:64
wcs
table::Key< table::Array< std::uint8_t > > wcs
Definition: SkyWcs.cc:71
FluxUtilities.h
lsst::afw::table::Schema
Defines the fields and offsets for a table.
Definition: Schema.h:50
lsst::meas::base::MagResultKey
A FunctorKey for MagResult.
Definition: FluxUtilities.h:138
lsst::afw::geom::SkyWcs
A 2-dimensional celestial WCS that transform pixels to ICRS RA/Dec, using the LSST standard for pixel...
Definition: SkyWcs.h:117
lsst::afw::geom.transform.transformContinued.name
string name
Definition: transformContinued.py:32
lsst::meas::base::Mag
double Mag
Definition: constants.h:53
lsst::meas::base::FluxResultKey
A FunctorKey for FluxResult.
Definition: FluxUtilities.h:59
BaseRecord.h
lsst::meas::base::MagResult::mag
Mag mag
Definition: FluxUtilities.h:128
lsst::meas::base::FluxResult::instFluxErr
meas::base::FluxErrElement instFluxErr
Standard deviation of instFlux in DN.
Definition: FluxUtilities.h:43
lsst::meas::base::FluxTransform::FluxTransform
FluxTransform(std::string const &name, afw::table::SchemaMapper &mapper)
Definition: FluxUtilities.cc:79
lsst::meas::base::MagResult::magErr
MagErrElement magErr
Definition: FluxUtilities.h:129
lsst::meas::base::BaseTransform::_name
std::string _name
Definition: Transform.h:107
lsst::meas::base::MagErrElement
double MagErrElement
Definition: constants.h:54
lsst::meas::base::FluxResultKey::set
virtual void set(afw::table::BaseRecord &record, FluxResult const &other) const
Set a FluxResult in the given record.
Definition: FluxUtilities.cc:52
lsst::meas::base::BaseTransform::checkCatalogSize
void checkCatalogSize(afw::table::BaseCatalog const &cat1, afw::table::BaseCatalog const &cat2) const
Ensure that catalogs have the same size.
Definition: Transform.h:102
lsst::afw::table._source.SourceCatalog
Definition: _source.py:32
lsst::afw::table::BaseRecord
Base class for all records.
Definition: BaseRecord.h:31
lsst::afw::table::SchemaMapper
A mapping between the keys of two Schemas, used to copy data between them.
Definition: SchemaMapper.h:21
lsst::meas::base::MagResultKey::addFields
static MagResultKey addFields(afw::table::Schema &schema, std::string const &name)
Add a pair of _mag, _magErr fields to a Schema, and return a MagResultKey that points to them.
Definition: FluxUtilities.cc:57
lsst::afw::table::CatalogIterator
Iterator class for CatalogT.
Definition: Catalog.h:39
lsst::afw::image::PhotoCalib
The photometric calibration of an exposure.
Definition: PhotoCalib.h:114
result
py::object result
Definition: _schema.cc:429
lsst
A base class for image defects.
Definition: imageAlgorithm.dox:1
lsst::meas::base::Flux
double Flux
Definition: constants.h:51
photoCalib
Key< int > photoCalib
Definition: Exposure.cc:67
lsst::meas::base::FluxResult::FluxResult
FluxResult()
Default constructor; initializes everything to NaN.
Definition: FluxUtilities.cc:32
lsst::afw::image::Measurement::value
double const value
Definition: PhotoCalib.h:53
Transform.h
lsst::afw::image::Measurement
A value and its error.
Definition: PhotoCalib.h:51
std
STL namespace.
mapper
SchemaMapper * mapper
Definition: SchemaMapper.cc:78
lsst::meas::base::FluxResultKey::addFields
static FluxResultKey addFields(afw::table::Schema &schema, std::string const &name, std::string const &doc)
Add a pair of _instFlux, _instFluxErr fields to a Schema, and return a FluxResultKey that points to t...
Definition: FluxUtilities.cc:36
lsst::afw::table::BaseRecord::set
void set(Key< T > const &key, U const &value)
Set value of a field for the given key.
Definition: BaseRecord.h:164
lsst::meas::base::BaseTransform
Abstract base class for all C++ measurement transformations.
Definition: Transform.h:86
lsst::afw::table::CatalogT::begin
iterator begin()
Iterator access.
Definition: Catalog.h:396
lsst::meas::base::FluxTransform::operator()
virtual void operator()(afw::table::SourceCatalog const &inputCatalog, afw::table::BaseCatalog &outputCatalog, afw::geom::SkyWcs const &wcs, afw::image::PhotoCalib const &photoCalib) const
Definition: FluxUtilities.cc:88
lsst::meas::base::MagResult
A reusable result struct for magnitudes.
Definition: FluxUtilities.h:127
lsst::afw::table::CatalogT< BaseRecord >