LSSTApplications  19.0.0-14-gb0260a2+72efe9b372,20.0.0+7927753e06,20.0.0+8829bf0056,20.0.0+995114c5d2,20.0.0+b6f4b2abd1,20.0.0+bddc4f4cbe,20.0.0-1-g253301a+8829bf0056,20.0.0-1-g2b7511a+0d71a2d77f,20.0.0-1-g5b95a8c+7461dd0434,20.0.0-12-g321c96ea+23efe4bbff,20.0.0-16-gfab17e72e+fdf35455f6,20.0.0-2-g0070d88+ba3ffc8f0b,20.0.0-2-g4dae9ad+ee58a624b3,20.0.0-2-g61b8584+5d3db074ba,20.0.0-2-gb780d76+d529cf1a41,20.0.0-2-ged6426c+226a441f5f,20.0.0-2-gf072044+8829bf0056,20.0.0-2-gf1f7952+ee58a624b3,20.0.0-20-geae50cf+e37fec0aee,20.0.0-25-g3dcad98+544a109665,20.0.0-25-g5eafb0f+ee58a624b3,20.0.0-27-g64178ef+f1f297b00a,20.0.0-3-g4cc78c6+e0676b0dc8,20.0.0-3-g8f21e14+4fd2c12c9a,20.0.0-3-gbd60e8c+187b78b4b8,20.0.0-3-gbecbe05+48431fa087,20.0.0-38-ge4adf513+a12e1f8e37,20.0.0-4-g97dc21a+544a109665,20.0.0-4-gb4befbc+087873070b,20.0.0-4-gf910f65+5d3db074ba,20.0.0-5-gdfe0fee+199202a608,20.0.0-5-gfbfe500+d529cf1a41,20.0.0-6-g64f541c+d529cf1a41,20.0.0-6-g9a5b7a1+a1cd37312e,20.0.0-68-ga3f3dda+5fca18c6a4,20.0.0-9-g4aef684+e18322736b,w.2020.45
LSSTDataManagementBasePackage
pluginsBase.py
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1 # This file is part of meas_base.
2 #
3 # Developed for the LSST Data Management System.
4 # This product includes software developed by the LSST Project
5 # (https://www.lsst.org).
6 # See the COPYRIGHT file at the top-level directory of this distribution
7 # for details of code ownership.
8 #
9 # This program is free software: you can redistribute it and/or modify
10 # it under the terms of the GNU General Public License as published by
11 # the Free Software Foundation, either version 3 of the License, or
12 # (at your option) any later version.
13 #
14 # This program is distributed in the hope that it will be useful,
15 # but WITHOUT ANY WARRANTY; without even the implied warranty of
16 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
17 # GNU General Public License for more details.
18 #
19 # You should have received a copy of the GNU General Public License
20 # along with this program. If not, see <https://www.gnu.org/licenses/>.
21 
22 import traceback
23 
24 import lsst.pex.config
25 from .transforms import PassThroughTransform
26 
27 __all__ = ("BasePluginConfig", "BasePlugin")
28 
29 
31  """
32  Base class measurement plugin config classes.
33 
34  Notes
35  -----
36  Most derived classes will want to set defaults that make sense for the
37  plugin type.
38  """
39  pass
40 
41 
42 class BasePlugin:
43  """
44  Base class for measurement plugins.
45 
46  This is the base class for `SingleFramePlugin` and `ForcedPlugin`; derived
47  classes should inherit from one of those.
48 
49  Parameters
50  ----------
51  config : `BasePluginConfig`
52  Plugin configuration.
53  name : `str`
54  Plugin name.
55  logName : `str`
56  Logger name.
57 
58  Notes
59  -----
60  Relative execution orders are defined by a series of named constants
61  defined in this class: plugins with a lower execution number are run
62  first.
63 
64  This approach was chosen instead of a full graph-based analysis of
65  dependencies because algorithm dependencies are usually both quite simple
66  and entirely substitutable: an algorithm that requires a centroid can
67  typically make use of any centroid algorithms outputs. That makes it
68  relatively easy to figure out the correct value to use for any particular
69  algorithm.
70  """
71 
72  CENTROID_ORDER = 0.0
73  """Order for algorithms which require only Footprint and Peaks (`float`).
74 
75  Notes
76  -----
77  Algorithms with this execution order include centroids.
78  """
79 
80  SHAPE_ORDER = 1.0
81  """Order for algorithms which require a centroid (`float`).
82 
83  Notes
84  -----
85  These algorithms may refer assume that `getCentroid` will return a good
86  centroid, and that a Footprint and its Peaks are available.
87  """
88 
89  FLUX_ORDER = 2.0
90  """Order for algorithms which require a shape and a centroid (`float`).
91 
92  Notes
93  -----
94  These algorithms may assume that both `getCentroid` and `getShape` will
95  return good values, and that a Footprint and its Peaks are available.
96  """
97 
98  APCORR_ORDER = 3.0
99  """Order for algorithms which require shape, centroid and flux (`float`).
100 
101  Notes
102  -----
103  These algorithms may assume that `getCentroid` and `getShape` will return
104  good values, that flux has been measured, and that and that a Footprint
105  and its Peaks are available.
106  """
107 
108  DEFAULT_CATALOGCALCULATION = 4.0
109  """Order for catalog calculation plugins.
110 
111  Notes
112  -----
113  These plugins only operate on catalogs; they may not access pixel values.
114  """
115 
116  ConfigClass = BasePluginConfig
117  """Plugin configuration information (`lsst.pex.config.Config`).
118  """
119 
120  @classmethod
122  """Get the relative execution order of this plugin.
123 
124  Must be reimplemented as a class method by concrete derived classes.
125  """
126  raise NotImplementedError("All plugins must implement getExecutionOrder()")
127 
128  def __init__(self, config, name, logName=None):
129  object.__init__(self)
130  self.config = config
131  self.name = name
132  self.logName = logName
133 
134  def getLogName(self):
135  return self.logName
136 
137  def fail(self, measRecord, error=None):
138  """Record a failure of the `measure` or `measureN` method.
139 
140  Parameters
141  ----------
142  measRecord : `lsst.afw.table.SourceRecord`
143  Table record describing the source being measured.
144  error : `MeasurementError`, optional
145  Only provided if the measurement failed due to a
146  `MeasurementError` being raised; otherwise, will be `None`.
147 
148  Notes
149  -----
150  When the plugin raises an exception, framework will call
151  `BasePlugin.fail` to allow the plugin to set its failure flag
152  field(s). When `BasePlugin.measureN` raises an exception,
153  `BasePlugin.fail` will be called repeatedly with all the records that
154  were being measured.
155 
156  If the exception is an `MeasurementError`, it will be passed as the
157  error argument; in all other cases the error argument will be `None`,
158  and the failure will be logged by the measurement framework as a
159  warning.
160 
161  """
162  traceback.print_exc()
163  message = ("The algorithm '%s' thinks it cannot fail, but it did; "
164  "please report this as a bug (the full traceback is above)."
165  % (self.__class__.__name__,))
166  raise NotImplementedError(message)
167 
168  @staticmethod
170  """Get the measurement transformation appropriate to this plugin.
171 
172  This returns a subclass of `transforms.MeasurementTransform`, which
173  may be instantiated with details of the algorithm configuration and
174  then called with information about calibration and WCS to convert from
175  raw measurement quantities to calibrated units. Calibrated data is
176  then provided in a separate output table.
177 
178  Notes
179  -----
180  By default, we copy everything from the input to the output without
181  transformation.
182  """
183  return PassThroughTransform
lsst::meas::base.pluginsBase.BasePlugin.fail
def fail(self, measRecord, error=None)
Definition: pluginsBase.py:137
lsst::meas::base.pluginsBase.BasePlugin.getLogName
def getLogName(self)
Definition: pluginsBase.py:134
lsst::meas::base.pluginsBase.BasePlugin.getExecutionOrder
def getExecutionOrder(cls)
Definition: pluginsBase.py:121
lsst::meas::base.pluginsBase.BasePluginConfig
Definition: pluginsBase.py:30
lsst::meas::base.pluginsBase.BasePlugin.__init__
def __init__(self, config, name, logName=None)
Definition: pluginsBase.py:128
lsst::meas::base.pluginsBase.BasePlugin.logName
logName
Definition: pluginsBase.py:132
lsst.pex.config
Definition: __init__.py:1
lsst::meas::base.pluginsBase.BasePlugin.name
name
Definition: pluginsBase.py:131
lsst::meas::base.pluginsBase.BasePlugin.config
config
Definition: pluginsBase.py:130
lsst.pex.config.config.Config
Definition: config.py:736
lsst::meas::base.pluginsBase.BasePlugin
Definition: pluginsBase.py:42
lsst::meas::base.pluginsBase.BasePlugin.getTransformClass
def getTransformClass()
Definition: pluginsBase.py:169