LSST Applications  21.0.0+04719a4bac,21.0.0-1-ga51b5d4+f5e6047307,21.0.0-11-g2b59f77+a9c1acf22d,21.0.0-11-ga42c5b2+86977b0b17,21.0.0-12-gf4ce030+76814010d2,21.0.0-13-g1721dae+760e7a6536,21.0.0-13-g3a573fe+768d78a30a,21.0.0-15-g5a7caf0+f21cbc5713,21.0.0-16-g0fb55c1+b60e2d390c,21.0.0-19-g4cded4ca+71a93a33c0,21.0.0-2-g103fe59+bb20972958,21.0.0-2-g45278ab+04719a4bac,21.0.0-2-g5242d73+3ad5d60fb1,21.0.0-2-g7f82c8f+8babb168e8,21.0.0-2-g8f08a60+06509c8b61,21.0.0-2-g8faa9b5+616205b9df,21.0.0-2-ga326454+8babb168e8,21.0.0-2-gde069b7+5e4aea9c2f,21.0.0-2-gecfae73+1d3a86e577,21.0.0-2-gfc62afb+3ad5d60fb1,21.0.0-25-g1d57be3cd+e73869a214,21.0.0-3-g357aad2+ed88757d29,21.0.0-3-g4a4ce7f+3ad5d60fb1,21.0.0-3-g4be5c26+3ad5d60fb1,21.0.0-3-g65f322c+e0b24896a3,21.0.0-3-g7d9da8d+616205b9df,21.0.0-3-ge02ed75+a9c1acf22d,21.0.0-4-g591bb35+a9c1acf22d,21.0.0-4-g65b4814+b60e2d390c,21.0.0-4-gccdca77+0de219a2bc,21.0.0-4-ge8a399c+6c55c39e83,21.0.0-5-gd00fb1e+05fce91b99,21.0.0-6-gc675373+3ad5d60fb1,21.0.0-64-g1122c245+4fb2b8f86e,21.0.0-7-g04766d7+cd19d05db2,21.0.0-7-gdf92d54+04719a4bac,21.0.0-8-g5674e7b+d1bd76f71f,master-gac4afde19b+a9c1acf22d,w.2021.13
LSST Data Management Base Package
Image.h
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1 // -*- lsst-c++ -*-
2 
3 /*
4  * LSST Data Management System
5  * Copyright 2008, 2009, 2010 LSST Corporation.
6  *
7  * This product includes software developed by the
8  * LSST Project (http://www.lsst.org/).
9  *
10  * This program is free software: you can redistribute it and/or modify
11  * it under the terms of the GNU General Public License as published by
12  * the Free Software Foundation, either version 3 of the License, or
13  * (at your option) any later version.
14  *
15  * This program is distributed in the hope that it will be useful,
16  * but WITHOUT ANY WARRANTY; without even the implied warranty of
17  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
18  * GNU General Public License for more details.
19  *
20  * You should have received a copy of the LSST License Statement and
21  * the GNU General Public License along with this program. If not,
22  * see <http://www.lsstcorp.org/LegalNotices/>.
23  */
24 
25 /*
26  * 2-D images
27  *
28  * This file contains the 2-d image support for LSST
29  */
30 #ifndef LSST_AFW_IMAGE_IMAGE_H
31 #define LSST_AFW_IMAGE_IMAGE_H
32 
33 #include <string>
34 #include <utility>
35 #include <functional>
36 
37 #include "boost/mpl/bool.hpp"
38 #include <climits>
39 #include <memory>
40 
41 #include "lsst/geom.h"
43 #include "lsst/afw/image/lsstGil.h"
45 #include "lsst/afw/image/Mask.h"
46 #include "lsst/afw/math/Function.h"
47 #include "lsst/afw/fitsDefaults.h"
49 #include "lsst/pex/exceptions.h"
50 #include "ndarray.h"
51 
52 namespace lsst {
53 namespace afw {
54 namespace image {
55 
57 template <typename PixelT>
58 class Image : public ImageBase<PixelT> {
59 public:
60  template <typename, typename, typename>
61  friend class MaskedImage;
62 
64 
66  template <typename ImagePT = PixelT>
70  };
71  template <typename OtherPixelT>
72  friend class Image; // needed by generalised copy constructors
73 
84  explicit Image(unsigned int width, unsigned int height, PixelT initialValue = 0);
94  explicit Image(lsst::geom::Extent2I const& dimensions = lsst::geom::Extent2I(), PixelT initialValue = 0);
101  explicit Image(lsst::geom::Box2I const& bbox, PixelT initialValue = 0);
102 
116  explicit Image(Image const& rhs, lsst::geom::Box2I const& bbox, ImageOrigin const origin = PARENT,
117  const bool deep = false);
127  Image(const Image& rhs, const bool deep = false);
128  Image(Image&& rhs);
129 
144  explicit Image(std::string const& fileName, int hdu = fits::DEFAULT_HDU,
148  bool allowUnsafe = false);
149 
164  explicit Image(fits::MemFileManager& manager, int hdu = fits::DEFAULT_HDU,
168  bool allowUnsafe = false);
169 
181  explicit Image(fits::Fits& fitsfile,
185  bool allowUnsafe = false);
186 
187  // generalised copy constructor
188  template <typename OtherPixelT>
189  Image(Image<OtherPixelT> const& rhs, const bool deep) : image::ImageBase<PixelT>(rhs, deep) {}
190 
191  explicit Image(ndarray::Array<PixelT, 2, 1> const& array, bool deep = false,
193  : image::ImageBase<PixelT>(array, deep, xy0) {}
194 
195  ~Image() override = default;
196  //
197  // Assignment operators are not inherited
198  //
200  Image& operator=(const PixelT rhs);
210  Image& operator=(const Image& rhs);
211  Image& operator=(Image&& rhs);
212 
227  return Image(*this, bbox, origin, false);
228  }
229 
231  Image operator[](lsst::geom::Box2I const& bbox) const { return subset(bbox); }
232 
234 
242  void writeFits(std::string const& fileName,
245  std::string const& mode = "w") const;
246 
257  std::string const& mode = "w") const;
258 
267 
277  void writeFits(std::string const& filename, fits::ImageWriteOptions const& options,
278  std::string const& mode = "w",
280  std::shared_ptr<Mask<MaskPixel> const> mask = nullptr) const;
281 
292  std::string const& mode = "w",
294  std::shared_ptr<Mask<MaskPixel> const> mask = nullptr) const;
295 
304  void writeFits(fits::Fits& fitsfile, fits::ImageWriteOptions const& options,
306  std::shared_ptr<Mask<MaskPixel> const> mask = nullptr) const;
307 
316  static Image readFits(std::string const& filename, int hdu = fits::DEFAULT_HDU) {
317  return Image<PixelT>(filename, hdu);
318  }
319 
328  static Image readFits(fits::MemFileManager& manager, int hdu = fits::DEFAULT_HDU) {
329  return Image<PixelT>(manager, hdu);
330  }
331 
332  void swap(Image& rhs);
333  //
334  // Operators etc.
335  //
337  Image& operator+=(PixelT const rhs);
339  virtual Image& operator+=(Image<PixelT> const& rhs);
347  void scaledPlus(double const c, Image<PixelT> const& rhs);
349  Image& operator-=(PixelT const rhs);
351  Image& operator-=(Image<PixelT> const& rhs);
359  void scaledMinus(double const c, Image<PixelT> const& rhs);
361  Image& operator*=(PixelT const rhs);
363  Image& operator*=(Image<PixelT> const& rhs);
365  void scaledMultiplies(double const c, Image<PixelT> const& rhs);
371  Image& operator/=(PixelT const rhs);
373  Image& operator/=(Image<PixelT> const& rhs);
375  void scaledDivides(double const c, Image<PixelT> const& rhs);
376 
377  // In-place per-pixel sqrt(). Useful when handling variance planes.
378  void sqrt();
379 
380 protected:
382 };
383 
385 template <typename LhsPixelT, typename RhsPixelT>
386 Image<LhsPixelT>& operator+=(Image<LhsPixelT>& lhs, Image<RhsPixelT> const& rhs);
388 template <typename LhsPixelT, typename RhsPixelT>
389 Image<LhsPixelT>& operator-=(Image<LhsPixelT>& lhs, Image<RhsPixelT> const& rhs);
391 template <typename LhsPixelT, typename RhsPixelT>
392 Image<LhsPixelT>& operator*=(Image<LhsPixelT>& lhs, Image<RhsPixelT> const& rhs);
394 template <typename LhsPixelT, typename RhsPixelT>
395 Image<LhsPixelT>& operator/=(Image<LhsPixelT>& lhs, Image<RhsPixelT> const& rhs);
396 
397 template <typename PixelT>
398 void swap(Image<PixelT>& a, Image<PixelT>& b);
399 
403 template <typename PixelT>
405 public:
420  explicit DecoratedImage(const lsst::geom::Box2I& bbox);
437  DecoratedImage(DecoratedImage const& rhs, const bool deep = false);
448  explicit DecoratedImage(std::string const& fileName, const int hdu = fits::DEFAULT_HDU,
450  ImageOrigin const origin = PARENT, bool allowUnsafe = false);
451 
458 
460  void setMetadata(std::shared_ptr<lsst::daf::base::PropertySet> metadata) { _metadata = metadata; }
461 
463  int getWidth() const { return _image->getWidth(); }
465  int getHeight() const { return _image->getHeight(); }
466 
468  int getX0() const { return _image->getX0(); }
470  int getY0() const { return _image->getY0(); }
471 
473  const lsst::geom::Extent2I getDimensions() const { return _image->getDimensions(); }
474 
475  void swap(DecoratedImage& rhs);
476 
484  void writeFits(std::string const& fileName,
487  std::string const& mode = "w") const;
488 
497  void writeFits(std::string const& fileName, fits::ImageWriteOptions const& options,
500  std::string const& mode = "w") const;
501 
505  std::shared_ptr<Image<PixelT> const> getImage() const { return _image; }
506 
512  double getGain() const { return _gain; }
514  void setGain(double gain) { _gain = gain; }
515 
516 private:
519 
520  double _gain;
521 
522  void init();
523 };
524 
525 template <typename PixelT>
526 void swap(DecoratedImage<PixelT>& a, DecoratedImage<PixelT>& b);
527 
533 
537 template <typename T1, typename T2>
538 bool imagesOverlap(ImageBase<T1> const& image1, ImageBase<T2> const& image2);
539 
540 } // namespace image
541 } // namespace afw
542 } // namespace lsst
543 
544 #endif
AmpInfoBoxKey bbox
Definition: Amplifier.cc:117
table::Key< double > gain
Definition: Amplifier.cc:118
afw::table::PointKey< int > dimensions
Definition: GaussianPsf.cc:49
afw::table::Key< afw::table::Array< MaskPixelT > > mask
table::Key< int > b
table::Key< int > a
A simple struct that combines the two arguments that must be passed to most cfitsio routines and cont...
Definition: fits.h:297
Lifetime-management for memory that goes into FITS memory files.
Definition: fits.h:121
A container for an Image and its associated metadata.
Definition: Image.h:404
void writeFits(std::string const &fileName, std::shared_ptr< lsst::daf::base::PropertySet const > metadata=std::shared_ptr< lsst::daf::base::PropertySet const >(), std::string const &mode="w") const
Write a FITS file.
std::shared_ptr< Image< PixelT > const > getImage() const
Return a shared_ptr to the DecoratedImage's Image as const.
Definition: Image.h:505
DecoratedImage(const lsst::geom::Extent2I &dimensions=lsst::geom::Extent2I())
Create an image of the specified size.
const lsst::geom::Extent2I getDimensions() const
Return the image's size; useful for passing to constructors.
Definition: Image.h:473
DecoratedImage & operator=(const DecoratedImage &image)
Assignment operator.
void swap(DecoratedImage &rhs)
double getGain() const
Return the DecoratedImage's gain.
Definition: Image.h:512
int getY0() const
Return the image's row-origin.
Definition: Image.h:470
int getHeight() const
Return the number of rows in the image.
Definition: Image.h:465
std::shared_ptr< Image< PixelT > > getImage()
Return a shared_ptr to the DecoratedImage's Image.
Definition: Image.h:503
std::shared_ptr< lsst::daf::base::PropertySet > getMetadata() const
Definition: Image.h:459
void setMetadata(std::shared_ptr< lsst::daf::base::PropertySet > metadata)
Definition: Image.h:460
int getX0() const
Return the image's column-origin.
Definition: Image.h:468
void setGain(double gain)
Set the DecoratedImage's gain.
Definition: Image.h:514
int getWidth() const
Return the number of columns in the image.
Definition: Image.h:463
The base class for all image classed (Image, Mask, MaskedImage, ...)
Definition: ImageBase.h:102
A class to represent a 2-dimensional array of pixels.
Definition: Image.h:58
void scaledPlus(double const c, Image< PixelT > const &rhs)
Add Image c*rhs to lhs.
Definition: Image.cc:500
Image & operator*=(PixelT const rhs)
Multiply lhs by scalar rhs.
Definition: Image.cc:558
void scaledMinus(double const c, Image< PixelT > const &rhs)
Subtract Image c*rhs from lhs.
Definition: Image.cc:532
Image & operator-=(PixelT const rhs)
Subtract scalar rhs from lhs.
Definition: Image.cc:513
Image(fits::Fits &fitsfile, std::shared_ptr< lsst::daf::base::PropertySet > metadata=std::shared_ptr< lsst::daf::base::PropertySet >(), lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Construct an Image from an already-open FITS object.
Image & operator=(const PixelT rhs)
Set the image's pixels to rhs.
Definition: Image.cc:350
Image subset(lsst::geom::Box2I const &bbox, ImageOrigin origin=PARENT) const
Return a subimage corresponding to the given box.
Definition: Image.h:226
Image(fits::MemFileManager &manager, int hdu=fits::DEFAULT_HDU, std::shared_ptr< lsst::daf::base::PropertySet > metadata=std::shared_ptr< lsst::daf::base::PropertySet >(), lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Construct an Image by reading a FITS image in memory.
Image operator[](lsst::geom::Box2I const &bbox) const
Return a subimage corresponding to the given box (interpreted as PARENT coordinates).
Definition: Image.h:231
void scaledMultiplies(double const c, Image< PixelT > const &rhs)
Multiply lhs by Image c*rhs (i.e. pixel-by-pixel multiplication)
Definition: Image.cc:577
Image & operator+=(PixelT const rhs)
Add scalar rhs to lhs.
Definition: Image.cc:468
static Image readFits(fits::MemFileManager &manager, int hdu=fits::DEFAULT_HDU)
Read an Image from a FITS RAM file.
Definition: Image.h:328
~Image() override=default
void swap(Image &rhs)
Definition: Image.cc:449
void writeFits(fits::MemFileManager &manager, fits::ImageWriteOptions const &options, std::string const &mode="w", std::shared_ptr< daf::base::PropertySet const > header=nullptr, std::shared_ptr< Mask< MaskPixel > const > mask=nullptr) const
Write an image to a FITS RAM file.
Image & operator/=(PixelT const rhs)
Divide lhs by scalar rhs.
Definition: Image.cc:590
Image(ndarray::Array< PixelT, 2, 1 > const &array, bool deep=false, lsst::geom::Point2I const &xy0=lsst::geom::Point2I())
Definition: Image.h:191
Image(Image< OtherPixelT > const &rhs, const bool deep)
Definition: Image.h:189
void writeFits(fits::MemFileManager &manager, std::shared_ptr< lsst::daf::base::PropertySet const > metadata=std::shared_ptr< lsst::daf::base::PropertySet const >(), std::string const &mode="w") const
Write an image to a FITS RAM file.
void writeFits(fits::Fits &fitsfile, fits::ImageWriteOptions const &options, std::shared_ptr< daf::base::PropertySet const > header=nullptr, std::shared_ptr< Mask< MaskPixel > const > mask=nullptr) const
Write an image to an open FITS file object.
void writeFits(std::string const &fileName, std::shared_ptr< lsst::daf::base::PropertySet const > metadata=std::shared_ptr< lsst::daf::base::PropertySet const >(), std::string const &mode="w") const
Write an image to a regular FITS file.
static Image readFits(std::string const &filename, int hdu=fits::DEFAULT_HDU)
Read an Image from a regular FITS file.
Definition: Image.h:316
void writeFits(fits::Fits &fitsfile, std::shared_ptr< lsst::daf::base::PropertySet const > metadata=std::shared_ptr< lsst::daf::base::PropertySet const >()) const
Write an image to an open FITS file object.
Image(std::string const &fileName, int hdu=fits::DEFAULT_HDU, std::shared_ptr< lsst::daf::base::PropertySet > metadata=std::shared_ptr< lsst::daf::base::PropertySet >(), lsst::geom::Box2I const &bbox=lsst::geom::Box2I(), ImageOrigin origin=PARENT, bool allowUnsafe=false)
Construct an Image by reading a regular FITS file.
detail::Image_tag image_category
Definition: Image.h:63
void scaledDivides(double const c, Image< PixelT > const &rhs)
Divide lhs by Image c*rhs (i.e. pixel-by-pixel division)
Definition: Image.cc:625
void writeFits(std::string const &filename, fits::ImageWriteOptions const &options, std::string const &mode="w", std::shared_ptr< daf::base::PropertySet const > header=nullptr, std::shared_ptr< Mask< MaskPixel > const > mask=nullptr) const
Write an image to a regular FITS file.
friend class Image
Definition: Image.h:72
Represent a 2-dimensional array of bitmask pixels.
Definition: Mask.h:77
A class to manipulate images, masks, and variance as a single object.
Definition: MaskedImage.h:73
A Function taking two arguments.
Definition: Function.h:259
Class for storing generic metadata.
Definition: PropertySet.h:67
An integer coordinate rectangle.
Definition: Box.h:55
const int DEFAULT_HDU
Specify that the default HDU should be read.
Definition: fitsDefaults.h:18
Backwards-compatibility support for depersisting the old Calib (FluxMag0/FluxMag0Err) objects.
Image< LhsPixelT > & operator+=(Image< LhsPixelT > &lhs, Image< RhsPixelT > const &rhs)
Add lhs to Image rhs (i.e. pixel-by-pixel addition) where types are different.
Definition: Image.cc:671
Image< LhsPixelT > & operator-=(Image< LhsPixelT > &lhs, Image< RhsPixelT > const &rhs)
Subtract lhs from Image rhs (i.e. pixel-by-pixel subtraction) where types are different.
Definition: Image.cc:677
lsst::geom::Box2I bboxFromMetadata(daf::base::PropertySet &metadata)
Determine the image bounding box from its metadata (FITS header)
Definition: Image.cc:694
Image< LhsPixelT > & operator/=(Image< LhsPixelT > &lhs, Image< RhsPixelT > const &rhs)
Divide lhs by Image rhs (i.e. pixel-by-pixel division) where types are different.
Definition: Image.cc:689
Image< LhsPixelT > & operator*=(Image< LhsPixelT > &lhs, Image< RhsPixelT > const &rhs)
Multiply lhs by Image rhs (i.e. pixel-by-pixel multiplication) where types are different.
Definition: Image.cc:683
bool imagesOverlap(ImageBase< T1 > const &image1, ImageBase< T2 > const &image2)
Return true if the pixels for two images or masks overlap in memory.
Definition: Image.cc:706
void swap(Image< PixelT > &a, Image< PixelT > &b)
Definition: Image.cc:456
A base class for image defects.
Options for writing an image to FITS.
Definition: fits.h:219
A templated class to return this classes' type (present in Image/Mask/MaskedImage)
Definition: Image.h:67
Image< ImagePT > type
Return the desired type.
Definition: Image.h:69