LSST Applications 24.1.6,g063fba187b+56b85ce14a,g0f08755f38+df8a265115,g12f32b3c4e+891a09f10d,g1524ad2192+7a5d7b3fbd,g1653933729+a8ce1bb630,g168dd56ebc+a8ce1bb630,g28da252d5a+07cb1400be,g2bbee38e9b+ae03bbfc84,g2bc492864f+ae03bbfc84,g3156d2b45e+6e55a43351,g347aa1857d+ae03bbfc84,g35bb328faa+a8ce1bb630,g3a166c0a6a+ae03bbfc84,g3e281a1b8c+c5dd892a6c,g414038480c+6b9177ef31,g41af890bb2+8f257c4c0b,g781aacb6e4+a8ce1bb630,g7af13505b9+7137b3b17d,g80478fca09+6df6903293,g82479be7b0+091ce1d07f,g858d7b2824+df8a265115,g89c8672015+f4add4ffd5,g9125e01d80+a8ce1bb630,g9726552aa6+414189b318,ga5288a1d22+4a2bca08d7,gacef1a1666+c9a8ff65f4,gb58c049af0+d64f4d3760,gbcfae0f0a0+de1d42d831,gc28159a63d+ae03bbfc84,gcf0d15dbbd+72117bf34e,gda6a2b7d83+72117bf34e,gdaeeff99f8+1711a396fd,ge500cccec5+c8c9c9af63,ge79ae78c31+ae03bbfc84,gf0baf85859+c1f95f4921,gfa517265be+df8a265115,gfa999e8aa5+17cd334064,gfb92a5be7c+df8a265115
LSST Data Management Base Package
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PhotoCalib.h
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1/*
2 * LSST Data Management System
3 * Copyright 2017 LSST Corporation.
4 *
5 * This product includes software developed by the
6 * LSST Project (http://www.lsst.org/).
7 *
8 * This program is free software: you can redistribute it and/or modify
9 * it under the terms of the GNU General Public License as published by
10 * the Free Software Foundation, either version 3 of the License, or
11 * (at your option) any later version.
12 *
13 * This program is distributed in the hope that it will be useful,
14 * but WITHOUT ANY WARRANTY; without even the implied warranty of
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16 * GNU General Public License for more details.
17 *
18 * You should have received a copy of the LSST License Statement and
19 * the GNU General Public License along with this program. If not,
20 * see <http://www.lsstcorp.org/LegalNotices/>.
21 */
22
23#ifndef LSST_AFW_IMAGE_PHOTOCALIB_H
24#define LSST_AFW_IMAGE_PHOTOCALIB_H
25
32#include "boost/format.hpp"
33
36#include "lsst/geom/Point.h"
37#include "lsst/geom/Box.h"
45
46namespace lsst {
47namespace afw {
48namespace image {
49
52 Measurement(double value, double error) : value(value), error(error) {}
53 double const value;
54 double const error;
55};
56
57std::ostream &operator<<(std::ostream &os, Measurement const &measurement);
58
69inline void assertNonNegative(double value, std::string const &name) {
70 if (value < 0) {
72 (boost::format("%s must be positive: %.3g") % name % value).str());
73 }
74}
75
114class PhotoCalib final : public table::io::PersistableFacade<PhotoCalib>, public typehandling::Storable {
115public:
116 // Allow move, but no copy
117 PhotoCalib(PhotoCalib const &) = default;
118 PhotoCalib(PhotoCalib &&) = default;
119 PhotoCalib &operator=(PhotoCalib const &) = delete;
121
122 ~PhotoCalib() override = default;
123
128
137 explicit PhotoCalib(double calibrationMean, double calibrationErr = 0,
139 : _calibrationMean(calibrationMean), _calibrationErr(calibrationErr), _isConstant(true) {
140 assertNonNegative(_calibrationMean, "Calibration mean");
141 assertNonNegative(_calibrationErr, "Calibration error");
142 ndarray::Array<double, 2, 2> coeffs = ndarray::allocate(ndarray::makeVector(1, 1));
143 coeffs[0][0] = calibrationMean;
144 _calibration = std::make_shared<afw::math::ChebyshevBoundedField>(
146 }
147
155 : _calibration(calibration),
156 _calibrationMean(computeCalibrationMean(calibration)),
157 _calibrationErr(calibrationErr),
158 _isConstant(false) {
159 assertNonNegative(_calibrationMean, "Calibration (computed via BoundedField.mean()) mean");
160 assertNonNegative(_calibrationErr, "Calibration error");
161 }
162
173 : _calibration(calibration),
174 _calibrationMean(calibrationMean),
175 _calibrationErr(calibrationErr),
176 _isConstant(isConstant) {
177 assertNonNegative(_calibrationMean, "Calibration mean");
178 assertNonNegative(_calibrationErr, "Calibration error");
179 }
180
191 double instFluxToNanojansky(double instFlux, lsst::geom::Point<double, 2> const &point) const;
192
194 double instFluxToNanojansky(double instFlux) const;
195
207 Measurement instFluxToNanojansky(double instFlux, double instFluxErr,
208 lsst::geom::Point<double, 2> const &point) const;
209
211 Measurement instFluxToNanojansky(double instFlux, double instFluxErr) const;
212
226 std::string const &instFluxField) const;
227
240 ndarray::Array<double, 2, 2> instFluxToNanojansky(afw::table::SourceCatalog const &sourceCatalog,
241 std::string const &instFluxField) const;
242
256 void instFluxToNanojansky(afw::table::SourceCatalog &sourceCatalog, std::string const &instFluxField,
257 std::string const &outField) const;
258
269 double instFluxToMagnitude(double instFlux, lsst::geom::Point<double, 2> const &point) const;
270
272 double instFluxToMagnitude(double instFlux) const;
273
285 Measurement instFluxToMagnitude(double instFlux, double instFluxErr,
286 lsst::geom::Point<double, 2> const &point) const;
287
289 Measurement instFluxToMagnitude(double instFlux, double instFluxErr) const;
290
304 std::string const &instFluxField) const;
305
318 ndarray::Array<double, 2, 2> instFluxToMagnitude(afw::table::SourceCatalog const &sourceCatalog,
319 std::string const &instFluxField) const;
320
337 void instFluxToMagnitude(afw::table::SourceCatalog &sourceCatalog, std::string const &instFluxField,
338 std::string const &outField) const;
339
351 bool includeScaleUncertainty = true) const;
352
367 bool includeScaleUncertainty = true) const;
368
386 std::vector<std::string> const &instFluxFields) const;
387
390
403 double magnitudeToInstFlux(double magnitude, lsst::geom::Point<double, 2> const &point) const;
404
406 double magnitudeToInstFlux(double magnitude) const;
407
420 double getCalibrationMean() const { return _calibrationMean; }
421
434 double getCalibrationErr() const { return _calibrationErr; }
435
441 bool isConstant() const { return _isConstant; }
442
455 double getInstFluxAtZeroMagnitude() const { return cpputils::referenceFlux / _calibrationMean; }
456
473 double getLocalCalibration(lsst::geom::Point<double, 2> const &point) const { return evaluate(point); }
474
489
512
514 bool operator==(PhotoCalib const &rhs) const;
515
517 bool operator!=(PhotoCalib const &rhs) const { return !(*this == rhs); }
518
519 bool isPersistable() const noexcept override { return true; }
520
523
525 std::string toString() const override;
526
532 bool equals(typehandling::Storable const &other) const noexcept override;
533 // PhotoCalib equality comparable but intentionally not hashable
534
535protected:
536 std::string getPersistenceName() const override;
537
538 void write(OutputArchiveHandle &handle) const override;
539
540private:
542
543 // The "mean" calibration, defined as the geometric mean of _calibration evaluated over _calibration's
544 // bbox. Computed on instantiation as a convinience. Also, the actual calibration for a spatially-constant
545 // calibration.
546 double _calibrationMean;
547
548 // The standard deviation of this PhotoCalib.
549 double _calibrationErr;
550
551 // Is this spatially-constant? Used to short-circuit getting centroids.
552 bool _isConstant;
553
559 double evaluate(lsst::geom::Point<double, 2> const &point) const;
563 ndarray::Array<double, 1> evaluateArray(ndarray::Array<double, 1> const &xx,
564 ndarray::Array<double, 1> const &yy) const;
568 ndarray::Array<double, 1> evaluateCatalog(afw::table::SourceCatalog const &sourceCatalog) const;
569
571 double computeCalibrationMean(std::shared_ptr<afw::math::BoundedField> calibration) const;
572
574 void instFluxToNanojanskyArray(afw::table::SourceCatalog const &sourceCatalog,
575 std::string const &instFluxField,
576 ndarray::Array<double, 2, 2> result) const;
577 void instFluxToMagnitudeArray(afw::table::SourceCatalog const &sourceCatalog,
578 std::string const &instFluxField,
579 ndarray::Array<double, 2, 2> result) const;
580};
581
594
608std::shared_ptr<PhotoCalib> makePhotoCalibFromCalibZeroPoint(double instFluxMag0, double instFluxMag0Err);
609
610} // namespace image
611} // namespace afw
612} // namespace lsst
613
614#endif // LSST_AFW_IMAGE_PHOTOCALIB_H
py::object result
Definition _schema.cc:429
AmpInfoBoxKey bbox
Definition Amplifier.cc:117
#define LSST_EXCEPT(type,...)
Create an exception with a given type.
Definition Exception.h:48
Utilities for converting between flux and magnitude in C++.
table::Key< double > calibrationMean
table::Key< double > calibrationErr
A class to manipulate images, masks, and variance as a single object.
Definition MaskedImage.h:74
The photometric calibration of an exposure.
Definition PhotoCalib.h:114
PhotoCalib(double calibrationMean, double calibrationErr, std::shared_ptr< afw::math::BoundedField > calibration, bool isConstant)
Create a calibration with a pre-computed mean.
Definition PhotoCalib.h:171
afw::table::SourceCatalog calibrateCatalog(afw::table::SourceCatalog const &catalog, std::vector< std::string > const &instFluxFields) const
Return a flux calibrated catalog, with new _flux, _fluxErr, _mag, and _magErr fields.
bool operator==(PhotoCalib const &rhs) const
Two PhotoCalibs are equal if their component bounded fields and calibrationErr are equal.
double getCalibrationMean() const
Get the mean photometric calibration.
Definition PhotoCalib.h:420
PhotoCalib(PhotoCalib &&)=default
double instFluxToNanojansky(double instFlux, lsst::geom::Point< double, 2 > const &point) const
Convert instFlux in ADU to nJy at a point in the BoundedField.
std::string getPersistenceName() const override
Return the unique name used to persist this object and look up its factory.
PhotoCalib()
Create a empty, zeroed calibration.
Definition PhotoCalib.h:127
MaskedImage< float > uncalibrateImage(MaskedImage< float > const &maskedImage, bool includeScaleUncertainty=true) const
Return a un-calibrated image, with pixel values in ADU (or whatever the original input to this photoC...
PhotoCalib(PhotoCalib const &)=default
double instFluxToMagnitude(double instFlux, lsst::geom::Point< double, 2 > const &point) const
Convert instFlux in ADU to AB magnitude.
PhotoCalib(double calibrationMean, double calibrationErr=0, lsst::geom::Box2I const &bbox=lsst::geom::Box2I())
Create a non-spatially-varying calibration.
Definition PhotoCalib.h:137
std::string toString() const override
Create a string representation of this object.
bool operator!=(PhotoCalib const &rhs) const
Two PhotoCalibs are equal if their component bounded fields and calibrationErr are equal.
Definition PhotoCalib.h:517
bool equals(typehandling::Storable const &other) const noexcept override
Compare this object to another Storable.
PhotoCalib(std::shared_ptr< afw::math::BoundedField > calibration, double calibrationErr=0)
Create a spatially-varying calibration.
Definition PhotoCalib.h:154
PhotoCalib & operator=(PhotoCalib const &)=delete
std::shared_ptr< typehandling::Storable > cloneStorable() const override
Create a new PhotoCalib that is a copy of this one.
double getLocalCalibration(lsst::geom::Point< double, 2 > const &point) const
Get the local calibration at a point.
Definition PhotoCalib.h:473
std::shared_ptr< afw::math::BoundedField > computeScalingTo(std::shared_ptr< PhotoCalib > other) const
Calculates the scaling between this PhotoCalib and another PhotoCalib.
void write(OutputArchiveHandle &handle) const override
Write the object to one or more catalogs.
bool isPersistable() const noexcept override
Return true if this particular object can be persisted using afw::table::io.
Definition PhotoCalib.h:519
double getCalibrationErr() const
Get the mean photometric calibration error.
Definition PhotoCalib.h:434
bool isConstant() const
Is this photoCalib spatially constant?
Definition PhotoCalib.h:441
MaskedImage< float > calibrateImage(MaskedImage< float > const &maskedImage, bool includeScaleUncertainty=true) const
Return a flux calibrated image, with pixel values in nJy.
~PhotoCalib() override=default
std::shared_ptr< afw::math::BoundedField > computeScaledCalibration() const
Calculates the spatially-variable calibration, normalized by the mean in the valid domain.
PhotoCalib & operator=(PhotoCalib &&)=delete
double magnitudeToInstFlux(double magnitude, lsst::geom::Point< double, 2 > const &point) const
Convert AB magnitude to instFlux (ADU).
double getInstFluxAtZeroMagnitude() const
Get the magnitude zero point (the instrumental flux corresponding to 0 magnitude).
Definition PhotoCalib.h:455
A BoundedField based on 2-d Chebyshev polynomials of the first kind.
Record class that contains measurements made on a single exposure.
Definition Source.h:78
A CRTP facade class for subclasses of Persistable.
io::OutputArchiveHandle OutputArchiveHandle
Interface supporting iteration over heterogenous containers.
Definition Storable.h:58
Class for storing generic metadata.
Definition PropertySet.h:66
An integer coordinate rectangle.
Definition Box.h:55
A coordinate class intended to represent absolute positions.
Definition Point.h:169
Reports invalid arguments.
Definition Runtime.h:66
bool strip
Definition fits.cc:930
std::shared_ptr< PhotoCalib > makePhotoCalibFromCalibZeroPoint(double instFluxMag0, double instFluxMag0Err)
Construct a PhotoCalib from the deprecated Calib-style instFluxMag0/instFluxMag0Err values.
std::shared_ptr< PhotoCalib > makePhotoCalibFromMetadata(daf::base::PropertySet &metadata, bool strip=false)
Construct a PhotoCalib from FITS FLUXMAG0/FLUXMAG0ERR keywords.
std::ostream & operator<<(std::ostream &os, Measurement const &measurement)
Definition PhotoCalib.cc:48
void assertNonNegative(double value, std::string const &name)
Raise lsst::pex::exceptions::InvalidParameterError if value is not >=0.
Definition PhotoCalib.h:69
const double referenceFlux
The Oke & Gunn (1983) AB magnitude reference flux, in nJy (often approximated as 3631....
Definition Magnitude.h:46
A value and its error.
Definition PhotoCalib.h:51
Measurement(double value, double error)
Definition PhotoCalib.h:52