lsst::afw::table::SourceColumnViewT< RecordT > Class Template Reference

#include <Source.h>

Inheritance diagram for lsst::afw::table::SourceColumnViewT< RecordT >:

Public Types
using	Record = RecordT
using	Table = typename RecordT::Table

Public Member Functions
ndarray::Array< double, 1 >	getPsfInstFlux () const
	Get the value of the PsfFlux slot measurement.
ndarray::Array< double, 1 >	getPsfInstFluxErr () const
	Get the uncertainty on the PsfFlux slot measurement.
ndarray::Array< double, 1 >	getApInstFlux () const
	Get the value of the ApFlux slot measurement.
ndarray::Array< double, 1 >	getApInstFluxErr () const
	Get the uncertainty on the ApFlux slot measurement.
ndarray::Array< double, 1 >	getModelInstFlux () const
	Get the value of the ModelFlux slot measurement.
ndarray::Array< double, 1 >	getModelInstFluxErr () const
	Get the uncertainty on the ModelFlux slot measurement.
ndarray::Array< double, 1 >	getGaussianInstFlux () const
	Get the value of the GaussianFlux slot measurement.
ndarray::Array< double, 1 >	getGaussianInstFluxErr () const
	Get the uncertainty on the GaussianFlux slot measurement.
ndarray::Array< double, 1 >	getCalibInstFlux () const
	Get the value of the CalibFlux slot measurement.
ndarray::Array< double, 1 >	getCalibInstFluxErr () const
	Get the uncertainty on the CalibFlux slot measurement.
ndarray::Array< double, 1 > const	getX () const
ndarray::Array< double, 1 > const	getY () const
ndarray::Array< double, 1 > const	getIxx () const
ndarray::Array< double, 1 > const	getIyy () const
ndarray::Array< double, 1 > const	getIxy () const
	SourceColumnViewT (SourceColumnViewT const &)=default
	SourceColumnViewT (SourceColumnViewT &&)=default
SourceColumnViewT &	operator= (SourceColumnViewT const &)=default
SourceColumnViewT &	operator= (SourceColumnViewT &&)=default
	~SourceColumnViewT ()=default
std::shared_ptr< Table >	getTable () const
	Return the table that owns the records.
Schema	getSchema () const
	Return the schema that defines the fields.
template<typename T >
ndarray::ArrayRef< T, 1 > const	operator[] (Key< T > const &key) const
	Return a 1-d array corresponding to a scalar field (or subfield).
template<typename T >
ndarray::ArrayRef< T, 2, 1 > const	operator[] (Key< Array< T > > const &key) const
	Return a 2-d array corresponding to an array field.
ndarray::result_of::vectorize< detail::FlagExtractor, ndarray::Array< Field< Flag >::Elementconst, 1 > >::type	operator[] (Key< Flag > const &key) const
	Return a 1-d array expression corresponding to a flag bit.
ndarray::Array< double, 1 > const	get_radians_array (Key< Angle > const &key) const
	Return an array column as a double array in radians.
BitsColumn	getBits (std::vector< Key< Flag > > const &keys) const
	Return an integer array with the given Flag fields repacked into individual bits.
BitsColumn	getAllBits () const
	Return an integer array with all Flag fields repacked into individual bits.

Static Public Member Functions
template<typename InputIterator >
static SourceColumnViewT	make (std::shared_ptr< Table > const &table, InputIterator first, InputIterator last)
	Construct a BaseColumnView from an iterator range.
template<typename InputIterator >
static BaseColumnView	make (std::shared_ptr< BaseTable > const &table, InputIterator first, InputIterator last)
	Construct a BaseColumnView from an iterator range.
template<typename InputIterator >
static bool	isRangeContiguous (std::shared_ptr< BaseTable > const &table, InputIterator first, InputIterator last)
	Return true if the given record iterator range is continuous and the records all belong to the given table.

Protected Member Functions
	SourceColumnViewT (BaseColumnView const &base)

Detailed Description

template<typename RecordT>
class lsst::afw::table::SourceColumnViewT< RecordT >

Definition at line 420 of file Source.h.

Member Typedef Documentation

Record

template<typename RecordT >

using lsst::afw::table::SourceColumnViewT< RecordT >::Record = RecordT

Definition at line 422 of file Source.h.

Table

template<typename RecordT >

using lsst::afw::table::SourceColumnViewT< RecordT >::Table = typename RecordT::Table

Definition at line 423 of file Source.h.

Constructor & Destructor Documentation

SourceColumnViewT() [1/3]

template<typename RecordT >

lsst::afw::table::SourceColumnViewT< RecordT >::SourceColumnViewT ( SourceColumnViewT< RecordT > const & )

default

SourceColumnViewT() [2/3]

template<typename RecordT >

lsst::afw::table::SourceColumnViewT< RecordT >::SourceColumnViewT ( SourceColumnViewT< RecordT > && )

default

~SourceColumnViewT()

template<typename RecordT >

lsst::afw::table::SourceColumnViewT< RecordT >::~SourceColumnViewT ( )

default

SourceColumnViewT() [3/3]

template<typename RecordT >

lsst::afw::table::SourceColumnViewT< RecordT >::SourceColumnViewT ( BaseColumnView const & base )

inlineexplicitprotected

Definition at line 504 of file Source.h.

: ColumnViewT<RecordT>(base) {}

Member Function Documentation

get_radians_array()

ndarray::Array< double, 1 > const lsst::afw::table::BaseColumnView::get_radians_array ( Key< Angle > const & key ) const

inherited

Return an array column as a double array in radians.

Definition at line 117 of file BaseColumnView.cc.

                                                                                            {
    using DoubleArray = ndarray::Array<double, 1>;
    using AngleArray = ndarray::Array<lsst::geom::Angle, 1>;
    AngleArray angle_array = (*this)[key];
    return ndarray::detail::ArrayAccess<DoubleArray>::construct(
        reinterpret_cast<double *>(angle_array.getData()),
        ndarray::detail::ArrayAccess<AngleArray>::getCore(angle_array)
    );
}

getAllBits()

BitsColumn lsst::afw::table::BaseColumnView::getAllBits ( ) const

inherited

Return an integer array with all Flag fields repacked into individual bits.

The returned object contains both the int64 array and accessors to obtain a mask given a Key or field name.

Exceptions

pex::exceptions::LengthError

if the schema has more than 64 Flag fields.

Definition at line 157 of file BaseColumnView.cc.

                                            {
    BitsColumn result(_impl->recordCount);
    ExtractFlagItems func = {&result._items};
    getSchema().forEach(func);
    if (result._items.size() > sizeof(BitsColumn::SizeT)) {
        throw LSST_EXCEPT(pex::exceptions::LengthError,
                          (boost::format("Too many Flag keys in schema; %d > %d.") % result._items.size() %
                           sizeof(BitsColumn::SizeT))
                                  .str());
    }
    ndarray::ArrayRef<BitsColumn::SizeT, 1, 1> array = result._array.deep();
    BitsColumn::SizeT const size = result._items.size();  // just for unsigned/signed comparisons
    for (BitsColumn::SizeT i = 0; i < size; ++i) {
        array |= (BitsColumn::SizeT(1) << i) * (*this)[result._items[i].key];
    }
    return result;
}

getApInstFlux()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getApInstFlux ( ) const

inline

Get the value of the ApFlux slot measurement.

Definition at line 438 of file Source.h.

                                                  {
        return this->operator[](this->getTable()->getApFluxSlot().getMeasKey());
    }

getApInstFluxErr()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getApInstFluxErr ( ) const

inline

Get the uncertainty on the ApFlux slot measurement.

Definition at line 442 of file Source.h.

                                                     {
        return this->operator[](this->getTable()->getApFluxSlot().getErrKey());
    }

getBits()

BitsColumn lsst::afw::table::BaseColumnView::getBits ( std::vector< Key< Flag > > const & keys ) const

inherited

Return an integer array with the given Flag fields repacked into individual bits.

The returned object contains both the int64 array and accessors to obtain a mask given a Key or field name.

Exceptions

pex::exceptions::LengthError

if keys.size() > 64

Definition at line 127 of file BaseColumnView.cc.

                                                                          {
    BitsColumn result(_impl->recordCount);
    ndarray::ArrayRef<BitsColumn::SizeT, 1, 1> array = result._array.deep();
    if (keys.size() > sizeof(BitsColumn::SizeT)) {
        throw LSST_EXCEPT(pex::exceptions::LengthError,
                          (boost::format("Too many keys passed to getBits(); %d > %d.") % keys.size() %
                           sizeof(BitsColumn::SizeT))
                                  .str());
    }
    BitsColumn::SizeT const size = keys.size();  // just for unsigned/signed comparisons
    for (BitsColumn::SizeT i = 0; i < size; ++i) {
        array |= (BitsColumn::SizeT(1) << i) * (*this)[keys[i]];
        result._items.push_back(getSchema().find(keys[i]));
    }
    return result;
}

getCalibInstFlux()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getCalibInstFlux ( ) const

inline

Get the value of the CalibFlux slot measurement.

Definition at line 465 of file Source.h.

                                                     {
        return this->operator[](this->getTable()->getCalibFluxSlot().getMeasKey());
    }

getCalibInstFluxErr()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getCalibInstFluxErr ( ) const

inline

Get the uncertainty on the CalibFlux slot measurement.

Definition at line 469 of file Source.h.

                                                        {
        return this->operator[](this->getTable()->getCalibFluxSlot().getErrKey());
    }

getGaussianInstFlux()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getGaussianInstFlux ( ) const

inline

Get the value of the GaussianFlux slot measurement.

Definition at line 456 of file Source.h.

                                                        {
        return this->operator[](this->getTable()->getGaussianFluxSlot().getMeasKey());
    }

getGaussianInstFluxErr()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getGaussianInstFluxErr ( ) const

inline

Get the uncertainty on the GaussianFlux slot measurement.

Definition at line 460 of file Source.h.

                                                           {
        return this->operator[](this->getTable()->getGaussianFluxSlot().getErrKey());
    }

getIxx()

template<typename RecordT >

ndarray::Array< double, 1 > const lsst::afw::table::SourceColumnViewT< RecordT >::getIxx ( ) const

inline

Definition at line 480 of file Source.h.

                                                 {
        return this->operator[](this->getTable()->getShapeSlot().getMeasKey().getIxx());
    }

getIxy()

template<typename RecordT >

ndarray::Array< double, 1 > const lsst::afw::table::SourceColumnViewT< RecordT >::getIxy ( ) const

inline

Definition at line 486 of file Source.h.

                                                 {
        return this->operator[](this->getTable()->getShapeSlot().getMeasKey().getIxy());
    }

getIyy()

template<typename RecordT >

ndarray::Array< double, 1 > const lsst::afw::table::SourceColumnViewT< RecordT >::getIyy ( ) const

inline

Definition at line 483 of file Source.h.

                                                 {
        return this->operator[](this->getTable()->getShapeSlot().getMeasKey().getIyy());
    }

getModelInstFlux()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getModelInstFlux ( ) const

inline

Get the value of the ModelFlux slot measurement.

Definition at line 447 of file Source.h.

                                                     {
        return this->operator[](this->getTable()->getModelFluxSlot().getMeasKey());
    }

getModelInstFluxErr()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getModelInstFluxErr ( ) const

inline

Get the uncertainty on the ModelFlux slot measurement.

Definition at line 451 of file Source.h.

                                                        {
        return this->operator[](this->getTable()->getModelFluxSlot().getErrKey());
    }

getPsfInstFlux()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getPsfInstFlux ( ) const

inline

Get the value of the PsfFlux slot measurement.

Definition at line 429 of file Source.h.

                                                   {
        return this->operator[](this->getTable()->getPsfFluxSlot().getMeasKey());
    }

getPsfInstFluxErr()

template<typename RecordT >

ndarray::Array< double, 1 > lsst::afw::table::SourceColumnViewT< RecordT >::getPsfInstFluxErr ( ) const

inline

Get the uncertainty on the PsfFlux slot measurement.

Definition at line 433 of file Source.h.

                                                      {
        return this->operator[](this->getTable()->getPsfFluxSlot().getErrKey());
    }

getSchema()

Schema lsst::afw::table::BaseColumnView::getSchema ( ) const

inlineinherited

Return the schema that defines the fields.

Definition at line 89 of file BaseColumnView.h.

{ return getTable()->getSchema(); }

getTable()

template<typename RecordT >

std::shared_ptr< Table > lsst::afw::table::ColumnViewT< RecordT >::getTable ( ) const

inlineinherited

Return the table that owns the records.

Definition at line 179 of file BaseColumnView.h.

                                          {
        return std::static_pointer_cast<Table>(BaseColumnView::getTable());
    }

getX()

template<typename RecordT >

ndarray::Array< double, 1 > const lsst::afw::table::SourceColumnViewT< RecordT >::getX ( ) const

inline

Definition at line 473 of file Source.h.

                                               {
        return this->operator[](this->getTable()->getCentroidSlot().getMeasKey().getX());
    }

getY()

template<typename RecordT >

ndarray::Array< double, 1 > const lsst::afw::table::SourceColumnViewT< RecordT >::getY ( ) const

inline

Definition at line 476 of file Source.h.

                                               {
        return this->operator[](this->getTable()->getCentroidSlot().getMeasKey().getY());
    }

isRangeContiguous()

template<typename InputIterator >

bool lsst::afw::table::BaseColumnView::isRangeContiguous ( std::shared_ptr< BaseTable > const & table, InputIterator first, InputIterator last )

staticinherited

Return true if the given record iterator range is continuous and the records all belong to the given table.

This tests exactly the same requiremetns needed to construct a column view, so if this test succeeds, BaseColumnView::make should as well.

Definition at line 221 of file BaseColumnView.h.

                                                           {
    if (first == last) return true;
    Schema schema = table->getSchema();
    std::size_t recordSize = schema.getRecordSize();
    std::size_t recordCount = 1;
    void* buf = first->_data;
    ndarray::Manager::Ptr manager = first->_manager;
    char* expected = reinterpret_cast<char*>(buf) + recordSize;
    for (++first; first != last; ++first, ++recordCount, expected += recordSize) {
        if (first->_data != expected || first->_manager != manager) {
            return false;
        }
    }
    return true;
}

make() [1/2]

template<typename InputIterator >

BaseColumnView lsst::afw::table::BaseColumnView::make ( std::shared_ptr< BaseTable > const & table, InputIterator first, InputIterator last )

staticinherited

Construct a BaseColumnView from an iterator range.

The iterators must dereference to a reference or const reference to a record. If the record data is not contiguous in memory, throws lsst::pex::exceptions::RuntimeError.

Definition at line 200 of file BaseColumnView.h.

                                                        {
    if (first == last) {
        return BaseColumnView(table, 0, nullptr, ndarray::Manager::Ptr());
    }
    Schema schema = table->getSchema();
    std::size_t recordSize = schema.getRecordSize();
    std::size_t recordCount = 1;
    void* buf = first->_data;
    ndarray::Manager::Ptr manager = first->_manager;
    char* expected = reinterpret_cast<char*>(buf) + recordSize;
    for (++first; first != last; ++first, ++recordCount, expected += recordSize) {
        if (first->_data != expected || first->_manager != manager) {
            throw LSST_EXCEPT(lsst::pex::exceptions::RuntimeError,
                              "Record data is not contiguous in memory.");
        }
    }
    return BaseColumnView(table, recordCount, buf, manager);
}

make() [2/2]

template<typename RecordT >

template<typename InputIterator >

static SourceColumnViewT lsst::afw::table::SourceColumnViewT< RecordT >::make ( std::shared_ptr< Table > const & table, InputIterator first, InputIterator last )

inlinestatic

Construct a BaseColumnView from an iterator range.

The iterators must dereference to a reference or const reference to a record. If the record data is not contiguous in memory, throws lsst::pex::exceptions::RuntimeError.

Definition at line 492 of file Source.h.

                                                      {
        return SourceColumnViewT(BaseColumnView::make(table, first, last));
    }

operator=() [1/2]

template<typename RecordT >

SourceColumnViewT & lsst::afw::table::SourceColumnViewT< RecordT >::operator= ( SourceColumnViewT< RecordT > && )

default

operator=() [2/2]

template<typename RecordT >

SourceColumnViewT & lsst::afw::table::SourceColumnViewT< RecordT >::operator= ( SourceColumnViewT< RecordT > const & )

default

operator[]() [1/3]

template<typename T >

ndarray::ArrayRef< T, 2, 1 > const lsst::afw::table::BaseColumnView::operator[] ( Key< Array< T > > const & key ) const

inherited

Return a 2-d array corresponding to an array field.

Definition at line 84 of file BaseColumnView.cc.

                                                                                                  {
    if (!key.isValid()) {
        throw LSST_EXCEPT(
            pex::exceptions::LogicError,
            "Key is not valid (if this is a SourceCatalog, make sure slot aliases have been set up).");
    }
    if (key.isVariableLength()) {
        throw LSST_EXCEPT(pex::exceptions::LogicError, "Cannot get columns for variable-length array fields");
    }
    return ndarray::external(
            reinterpret_cast<T *>(reinterpret_cast<char *>(_impl->buf) + key.getOffset()),
            ndarray::makeVector(_impl->recordCount, key.getSize()),
            ndarray::makeVector(_impl->table->getSchema().getRecordSize() / sizeof(T), std::size_t(1)),
            _impl->manager);
}

operator[]() [2/3]

ndarray::result_of::vectorize< detail::FlagExtractor, ndarray::Array< Field< Flag >::Elementconst, 1 > >::type lsst::afw::table::BaseColumnView::operator[] ( Key< Flag > const & key ) const

inherited

Return a 1-d array expression corresponding to a flag bit.

In C++, the return value is a lazy ndarray expression template that performs the bitwise & operation on every element when that element is requested. In Python, the result will be copied into a bool NumPy array.

Definition at line 101 of file BaseColumnView.cc.

                                                             {
    if (!key.isValid()) {
        throw LSST_EXCEPT(
            pex::exceptions::LogicError,
            "Key is not valid (if this is a SourceCatalog, make sure slot aliases have been set up).");
    }
    return ndarray::vectorize(detail::FlagExtractor(key),
                              ndarray::Array<Field<Flag>::Element const, 1>(ndarray::external(
                                      reinterpret_cast<Field<Flag>::Element *>(
                                              reinterpret_cast<char *>(_impl->buf) + key.getOffset()),
                                      ndarray::makeVector(_impl->recordCount),
                                      ndarray::makeVector(_impl->table->getSchema().getRecordSize() /
                                                              sizeof(Field<Flag>::Element)),
                                      _impl->manager)));
}

operator[]() [3/3]

template<typename T >

ndarray::ArrayRef< T, 1 > const lsst::afw::table::BaseColumnView::operator[] ( Key< T > const & key ) const

inherited

Return a 1-d array corresponding to a scalar field (or subfield).

Definition at line 71 of file BaseColumnView.cc.

                                                                                       {
    if (!key.isValid()) {
        throw LSST_EXCEPT(
            pex::exceptions::LogicError,
            "Key is not valid (if this is a SourceCatalog, make sure slot aliases have been set up).");
    }
    return ndarray::external(reinterpret_cast<T *>(reinterpret_cast<char *>(_impl->buf) + key.getOffset()),
                             ndarray::makeVector(_impl->recordCount),
                             ndarray::makeVector(_impl->table->getSchema().getRecordSize() / sizeof(T)),
                             _impl->manager);
}

---

The documentation for this class was generated from the following files:

• /j/snowflake/release/lsstsw/stack/lsst-scipipe-9.0.0/Linux64/afw/gef2f8181fd+414189b318/include/lsst/afw/table/fwd.h
• /j/snowflake/release/lsstsw/stack/lsst-scipipe-9.0.0/Linux64/afw/gef2f8181fd+414189b318/include/lsst/afw/table/Source.h