addToCoadd.cc

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// -*- LSST-C++ -*-

/* 
 * LSST Data Management System
 * Copyright 2008, 2009, 2010 LSST Corporation.
 * 
 * This product includes software developed by the
 * LSST Project (http://www.lsst.org/).
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 * 
 * You should have received a copy of the LSST License Statement and 
 * the GNU General Public License along with this program.  If not, 
 * see <http://www.lsstcorp.org/LegalNotices/>.
 */
 
#include <cstdint>
#include <limits>

#include "boost/format.hpp"

#include "lsst/pex/exceptions.h"
#include "lsst/afw/geom.h"
#include "lsst/coadd/utils/addToCoadd.h"

namespace pexExcept = lsst::pex::exceptions;
namespace afwGeom = lsst::afw::geom;
namespace afwImage = lsst::afw::image;
namespace coaddUtils = lsst::coadd::utils;

namespace {
    /*
     * A boolean functor to test if a MaskedImage pixel is valid (mask & badPixel == 0)
     */
    struct CheckMask {
        CheckMask(lsst::afw::image::MaskPixel badPixel) : _badPixel(badPixel) {}
        
        template<typename T>
        bool operator()(T val) const {
            return ((val.mask() & _badPixel) == 0) ? true : false;
        }
    private:
        lsst::afw::image::MaskPixel _badPixel;
    };
    
    /*
     * A boolean functor to test if an Image pixel has known value (not NaN)
     */    
    struct CheckKnownValue {
        CheckKnownValue(lsst::afw::image::MaskPixel) {}
    
        template<typename T>
        bool operator()(T val) const {
            return !std::isnan(static_cast<float>(*val));
        }
    };
    
    /* 
     * Implementation of addToCoadd
     *
     * The template parameter isValidPixel is a functor with operator()
     * which returns true if a given image pixel is valid.
     * This allows us to support multiple image types including
     * MaskedImage with a mask bit and Image with a check for NaN.
     *
     * @return overlapping bounding box, relative to parent image
     */
    template <typename CoaddT, typename WeightPixelT, typename isValidPixel>
    static lsst::afw::geom::Box2I addToCoaddImpl(
        CoaddT &coadd,                                      
        lsst::afw::image::Image<WeightPixelT> &weightMap,   
        CoaddT const &image,                                
        lsst::afw::image::MaskPixel const badPixelMask,     
        WeightPixelT weight                                 
    ) {
        typedef typename afwImage::Image<WeightPixelT> WeightMapT;
        
        if (coadd.getBBox() != weightMap.getBBox()) {
            throw LSST_EXCEPT(pexExcept::InvalidParameterError,
                (boost::format("coadd and weightMap parent bboxes differ: %s != %s") %
                coadd.getBBox() % weightMap.getBBox()).str());
        }
        
        afwGeom::Box2I overlapBBox = coadd.getBBox();
        overlapBBox.clip(image.getBBox());
        if (overlapBBox.isEmpty()) {
            return overlapBBox;
        }
    
        CoaddT coaddView(coadd, overlapBBox, afwImage::PARENT, false);
        WeightMapT weightMapView(weightMap, overlapBBox, afwImage::PARENT, false);
        CoaddT imageView(image, overlapBBox, afwImage::PARENT, false);
    
        isValidPixel const isValid(badPixelMask); // functor to check if a pixel is good
        for (int y = 0, endY = imageView.getHeight(); y != endY; ++y) {
            typename CoaddT::const_x_iterator imageIter = imageView.row_begin(y);
            typename CoaddT::const_x_iterator const imageEndIter = imageView.row_end(y);
            typename CoaddT::x_iterator coaddIter = coaddView.row_begin(y);
            typename WeightMapT::x_iterator weightMapIter = weightMapView.row_begin(y);
            for (; imageIter != imageEndIter; ++imageIter, ++coaddIter, ++weightMapIter) {
                if (isValid(imageIter)) {
                    typename CoaddT::SinglePixel pix = *imageIter;
                    pix *= typename CoaddT::Pixel(weight);
                    *coaddIter += pix;
                    *weightMapIter += weight;
                }
            }
        }
        return overlapBBox;
    }
} // anonymous namespace

template <typename CoaddPixelT, typename WeightPixelT>
lsst::afw::geom::Box2I coaddUtils::addToCoadd(
    // spell out lsst:afw::image to make Doxygen happy
    lsst::afw::image::Image<CoaddPixelT> &coadd,
    lsst::afw::image::Image<WeightPixelT> &weightMap,
    lsst::afw::image::Image<CoaddPixelT> const &image,
    WeightPixelT weight
) {
    typedef lsst::afw::image::Image<CoaddPixelT> Image;
    return addToCoaddImpl<Image, WeightPixelT, CheckKnownValue>(coadd, weightMap, image, 0x0, weight);
}

template <typename CoaddPixelT, typename WeightPixelT>
lsst::afw::geom::Box2I coaddUtils::addToCoadd(
    // spell out lsst:afw::image to make Doxygen happy
    lsst::afw::image::MaskedImage<CoaddPixelT, lsst::afw::image::MaskPixel,
        lsst::afw::image::VariancePixel> &coadd,
    lsst::afw::image::Image<WeightPixelT> &weightMap,
    lsst::afw::image::MaskedImage<CoaddPixelT, lsst::afw::image::MaskPixel,
        lsst::afw::image::VariancePixel> const &maskedImage,
    lsst::afw::image::MaskPixel const badPixelMask,
    WeightPixelT weight
) {
    typedef lsst::afw::image::MaskedImage<CoaddPixelT> Image;
    return addToCoaddImpl<Image,WeightPixelT,CheckMask>(coadd, weightMap, maskedImage, badPixelMask, weight);
}

// Explicit instantiations

#define MASKEDIMAGE(IMAGEPIXEL) afwImage::MaskedImage<IMAGEPIXEL, \
    afwImage::MaskPixel, afwImage::VariancePixel>
#define INSTANTIATE(COADDPIXEL, WEIGHTPIXEL) \
    template lsst::afw::geom::Box2I coaddUtils::addToCoadd<COADDPIXEL, WEIGHTPIXEL>( \
        afwImage::Image<COADDPIXEL> &coadd, \
        afwImage::Image<WEIGHTPIXEL> &weightMap, \
        afwImage::Image<COADDPIXEL> const &image,       \
        WEIGHTPIXEL weight \
    ); \
    \
    template lsst::afw::geom::Box2I coaddUtils::addToCoadd<COADDPIXEL, WEIGHTPIXEL>( \
        MASKEDIMAGE(COADDPIXEL) &coadd, \
        afwImage::Image<WEIGHTPIXEL> &weightMap, \
        MASKEDIMAGE(COADDPIXEL) const &image, \
        afwImage::MaskPixel const badPixelMask, \
        WEIGHTPIXEL weight \
    );

INSTANTIATE(double, double);
INSTANTIATE(double, float);
INSTANTIATE(double, int);
INSTANTIATE(double, std::uint16_t);
INSTANTIATE(float, double);
INSTANTIATE(float, float);
INSTANTIATE(float, int);
INSTANTIATE(float, std::uint16_t);