LSST Applications
21.0.0+04719a4bac,21.0.0-1-ga51b5d4+f5e6047307,21.0.0-11-g2b59f77+a9c1acf22d,21.0.0-11-ga42c5b2+86977b0b17,21.0.0-12-gf4ce030+76814010d2,21.0.0-13-g1721dae+760e7a6536,21.0.0-13-g3a573fe+768d78a30a,21.0.0-15-g5a7caf0+f21cbc5713,21.0.0-16-g0fb55c1+b60e2d390c,21.0.0-19-g4cded4ca+71a93a33c0,21.0.0-2-g103fe59+bb20972958,21.0.0-2-g45278ab+04719a4bac,21.0.0-2-g5242d73+3ad5d60fb1,21.0.0-2-g7f82c8f+8babb168e8,21.0.0-2-g8f08a60+06509c8b61,21.0.0-2-g8faa9b5+616205b9df,21.0.0-2-ga326454+8babb168e8,21.0.0-2-gde069b7+5e4aea9c2f,21.0.0-2-gecfae73+1d3a86e577,21.0.0-2-gfc62afb+3ad5d60fb1,21.0.0-25-g1d57be3cd+e73869a214,21.0.0-3-g357aad2+ed88757d29,21.0.0-3-g4a4ce7f+3ad5d60fb1,21.0.0-3-g4be5c26+3ad5d60fb1,21.0.0-3-g65f322c+e0b24896a3,21.0.0-3-g7d9da8d+616205b9df,21.0.0-3-ge02ed75+a9c1acf22d,21.0.0-4-g591bb35+a9c1acf22d,21.0.0-4-g65b4814+b60e2d390c,21.0.0-4-gccdca77+0de219a2bc,21.0.0-4-ge8a399c+6c55c39e83,21.0.0-5-gd00fb1e+05fce91b99,21.0.0-6-gc675373+3ad5d60fb1,21.0.0-64-g1122c245+4fb2b8f86e,21.0.0-7-g04766d7+cd19d05db2,21.0.0-7-gdf92d54+04719a4bac,21.0.0-8-g5674e7b+d1bd76f71f,master-gac4afde19b+a9c1acf22d,w.2021.13
LSST Data Management Base Package
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Public Member Functions | |
def | run (self, args) |
def | parseAndRun (cls) |
def | prepareTask (cls, root=None, dryrun=False, mode="move", create=False, ignoreIngested=False) |
def | ingest (self, infile, outfile, mode="move", dryrun=False) |
def | isBadFile (self, filename, badFileList) |
def | isBadId (self, info, badIdList) |
def | expandFiles (self, fileNameList) |
Expand a set of filenames and globs, returning a list of filenames. More... | |
def | runFile (self, infile, registry, args, pos) |
Examine and ingest a single file. More... | |
def | ingestFiles (self, fileList) |
def | emptyMetadata (self) |
def | getSchemaCatalogs (self) |
def | getAllSchemaCatalogs (self) |
def | getFullMetadata (self) |
def | getFullName (self) |
def | getName (self) |
def | getTaskDict (self) |
def | makeSubtask (self, name, **keyArgs) |
def | timer (self, name, logLevel=Log.DEBUG) |
def | makeField (cls, doc) |
def | __reduce__ (self) |
Public Attributes | |
metadata | |
log | |
config | |
Static Public Attributes | |
ConfigClass = IngestCalibsConfig | |
ArgumentParser = IngestCalibsArgumentParser | |
Task that generates registry for calibration images
Definition at line 231 of file ingestCalibs.py.
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Pickler.
Reimplemented in lsst.pipe.drivers.multiBandDriver.MultiBandDriverTask, and lsst.pipe.drivers.coaddDriver.CoaddDriverTask.
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Empty (clear) the metadata for this Task and all sub-Tasks.
Definition at line 166 of file task.py.
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Get schema catalogs for all tasks in the hierarchy, combining the results into a single dict. Returns ------- schemacatalogs : `dict` Keys are butler dataset type, values are a empty catalog (an instance of the appropriate `lsst.afw.table` Catalog type) for all tasks in the hierarchy, from the top-level task down through all subtasks. Notes ----- This method may be called on any task in the hierarchy; it will return the same answer, regardless. The default implementation should always suffice. If your subtask uses schemas the override `Task.getSchemaCatalogs`, not this method.
Definition at line 204 of file task.py.
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Get metadata for all tasks. Returns ------- metadata : `lsst.daf.base.PropertySet` The `~lsst.daf.base.PropertySet` keys are the full task name. Values are metadata for the top-level task and all subtasks, sub-subtasks, etc. Notes ----- The returned metadata includes timing information (if ``@timer.timeMethod`` is used) and any metadata set by the task. The name of each item consists of the full task name with ``.`` replaced by ``:``, followed by ``.`` and the name of the item, e.g.:: topLevelTaskName:subtaskName:subsubtaskName.itemName using ``:`` in the full task name disambiguates the rare situation that a task has a subtask and a metadata item with the same name.
Definition at line 229 of file task.py.
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Get the task name as a hierarchical name including parent task names. Returns ------- fullName : `str` The full name consists of the name of the parent task and each subtask separated by periods. For example: - The full name of top-level task "top" is simply "top". - The full name of subtask "sub" of top-level task "top" is "top.sub". - The full name of subtask "sub2" of subtask "sub" of top-level task "top" is "top.sub.sub2".
Definition at line 256 of file task.py.
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Get the name of the task. Returns ------- taskName : `str` Name of the task. See also -------- getFullName
Definition at line 274 of file task.py.
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Get the schemas generated by this task. Returns ------- schemaCatalogs : `dict` Keys are butler dataset type, values are an empty catalog (an instance of the appropriate `lsst.afw.table` Catalog type) for this task. Notes ----- .. warning:: Subclasses that use schemas must override this method. The default implementation returns an empty dict. This method may be called at any time after the Task is constructed, which means that all task schemas should be computed at construction time, *not* when data is actually processed. This reflects the philosophy that the schema should not depend on the data. Returning catalogs rather than just schemas allows us to save e.g. slots for SourceCatalog as well. See also -------- Task.getAllSchemaCatalogs
Definition at line 172 of file task.py.
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Get a dictionary of all tasks as a shallow copy. Returns ------- taskDict : `dict` Dictionary containing full task name: task object for the top-level task and all subtasks, sub-subtasks, etc.
Definition at line 288 of file task.py.
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Return whether the file information qualifies as bad We match against the list of bad data identifiers.
Definition at line 545 of file ingest.py.
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Make a `lsst.pex.config.ConfigurableField` for this task. Parameters ---------- doc : `str` Help text for the field. Returns ------- configurableField : `lsst.pex.config.ConfigurableField` A `~ConfigurableField` for this task. Examples -------- Provides a convenient way to specify this task is a subtask of another task. Here is an example of use: .. code-block:: python class OtherTaskConfig(lsst.pex.config.Config): aSubtask = ATaskClass.makeField("brief description of task")
Definition at line 359 of file task.py.
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Create a subtask as a new instance as the ``name`` attribute of this task. Parameters ---------- name : `str` Brief name of the subtask. keyArgs Extra keyword arguments used to construct the task. The following arguments are automatically provided and cannot be overridden: - "config". - "parentTask". Notes ----- The subtask must be defined by ``Task.config.name``, an instance of `~lsst.pex.config.ConfigurableField` or `~lsst.pex.config.RegistryField`.
Definition at line 299 of file task.py.
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inherited |
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Prepare for running the task repeatedly with `ingestFiles`. Saves the parsed arguments, including the Butler and log, as a private instance variable. Parameters ---------- root : `str`, optional Repository root pathname. If None, run the Task using the command line arguments, ignoring all other arguments below. dryrun : `bool`, optional If True, don't perform any action; log what would have happened. mode : `str`, optional How files are delivered to their destination. Default is "move", unlike the command-line default of "link". create : `bool`, optional If True, create a new registry, clobbering any old one present. ignoreIngested : `bool`, optional If True, do not complain if the file is already present in the registry (and do nothing else). Returns ------- task : `IngestTask` If `root` was provided, the IngestTask instance
Definition at line 434 of file ingest.py.
def lsst.pipe.tasks.ingestCalibs.IngestCalibsTask.run | ( | self, | |
args | |||
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Ingest all specified files and add them to the registry
Reimplemented from lsst.pipe.tasks.ingest.IngestTask.
Reimplemented in lsst.pipe.tasks.ingestCuratedCalibs.IngestCuratedCalibsTask.
Definition at line 237 of file ingestCalibs.py.
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inherited |
Examine and ingest a single file.
@param infile: File to process @param registry: Registry into which to insert Butler metadata, or None @param args: Parsed command-line arguments @param pos: Position number of this file in the input list @return parsed information from FITS HDUs if registry is None; or None
Definition at line 576 of file ingest.py.
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inherited |
Context manager to log performance data for an arbitrary block of code. Parameters ---------- name : `str` Name of code being timed; data will be logged using item name: ``Start`` and ``End``. logLevel A `lsst.log` level constant. Examples -------- Creating a timer context: .. code-block:: python with self.timer("someCodeToTime"): pass # code to time See also -------- timer.logInfo
Definition at line 327 of file task.py.
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Definition at line 234 of file ingestCalibs.py.
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Definition at line 233 of file ingestCalibs.py.